Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi932g00012 | ATGGACAAAATCAAAATCAAATCTCATCGCACCAACTCCAAACTTCATCTTCCTCAAGGGAAAGATCAGATTCATAAACAGCTACATCATCAAGATTTGTCACCTGATTCTAGCTCTTCCAGTGGCGGGGTTGGAGACAAAGATTCGTTCTCATTTAAATTTGGGTGGAAATCTTCTAAACAATCGGTTGGAACTCCGATTAAGAAGTTATTAGCTGAAGAGATGTCACCAATGACTGAAACCAAGAGAAGACCTCCAGGTGTTATAGCCAGATTGATGGGTCTTGACGGGCTTCCGTCCCAGCATCTGCATAAGTCGGTGCCTTTAGAGAAGACTCAAAGCAGAGGATTGTCAAATGAAGGTCGGTCCTCTAGGAGAAGCTCAAGGGATCAGGAAGAATTTAAGGATGTATTTGAGGTCTCAGAGATCCCGAAGGTAGAGAGTGGTAGGCATTCGTCTTCAGACTTCAAGGCTCATGAAGATGAAATGTCATTCATTGAACAGAAGTTCATGAATGCCAAACGCCTTGCAACTTATCAGGATTATCAGTCTTCTAAGGAATTCCATGAGACACTTGAGGTTTTGGACTCGAACAAGGATCTTCTGCTAAAATATCTTAAGCAGCCAGATTCTTTGTTTAAAAAGCATTTGAATGATCTACAAGGTTCCCCTTTTCAATCACATTCCGGTCATGTAGCACCACCCAATATGGAGAACTTTGACCATGGTTTAAATTGGAGATCAGATAAGGAGGCACAACATGTGAATTACAATAGGTTTCATCAGAAGCACTCTGATGATTATCACAACCAATTTGACAAAAGGCGTGTGATGCAGAATCCACCAAGATCATCAAAGCACCGGTTTAAGGGTAGCCGTGAACAATCTGCAGTCGCGACAAAGATTGTTGTCCTAAAGCCGAATCTTGGAAAATTACAGAATGGTACCAAAATTCAATCATCACCTTGTTCTCCGCATAACTTTCTGTCAGAACATGGAAATCAGGTTGAATTTTCAGATGTCAGATTTAGAGATGCTGAACTGTATAAAAAAATTAATTTGCCTGACAGTGCCAGGTCTTTTAGGCACAATTCTTTAGAATCTACAGAAATTGCAAAAGAAGTAACTAGGCAAATGAAAAACAGTCTGAGCAGAGGTTGTATGATGTCTTCCTCTTCTAGATTTAAAGGATGTACTAGAAGCGATAGTTCAAGCAGTGCTTCTGGGAACGAATCTCCAGAGGAAATAACAGCGCCTATCGGTGACCCATTTGACTTAAGTAAACGTAGCAGGCGCTCACCGCGTTCTAATGAATCATCTGTGAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAGATGGCACACAAATCCCAAGAGGTGCAAGGCTCGAGCAGGAGCAGCACACTGGCTGATATGCTAGCATTCCCTGGTAAAAAGGGTACACGGTTTGACAGCATGGCAAATGGGGGAGGTTTCTATGATAAGTTTGCTCGCAATGGTGAACCTTCTGGGTGGGTTGAACCACTGGGTATCAGCAGCAAGGATGGTTGGAGGGATGCATCTATTGGAAGTTTGTCGAGGTCAAAATCTCTTCCTGCATCTTCTACTGTTTTTGGAAATGCTAGAACATTTATGTGTGCTGAAGCCCTTCGTAATGATCGATATATGGGGCCAAAGGACCTTAAACGGGAGAGGAGAAGAGCTACAATGAGTCTTGATCATAGACATGGTTTGAATTCTAGAAGCACTATATCTGGTCACAAGAAGTCTTGGTCTTTGCTTTCATCGAAGCAGGAAGTTAATGAGTTCTCTCCAGACTTAAATGCAGTTGAAAATAACATAATGATCAATCTTGAAGAAGATTCACCCAATCTAGAGGTTCATTCTCCTGAAACCTTTGGCCAACGCCTTAGAAATACAAGTGTTGTTAGCGATGATGTCGTGGATGTAGCAAATGGAAACACAGATGGGTCTTTTGAACCTTCTTCGGATAAAGTGCTTCCTGGAACATCATCCTGTGTCTTAATAAAAGGAGACAGTAGTGGTGTTGAAGACAATTCAATACAAGAGGAAGTATCAGCTGGTTCTACAGGTGGAATTTCAGTCCTCTCTGAAGCACCTGCACCTGGACTTGAATCGCCATGCTGTAAAGATGCTGATCAGCCCAGTCCAATCTCAGTTCTAGATCCTTCTTTTACAGATGATGTGTCATCTTGTTCTGAATGTTTTGGGAGTGTCAGTGCTGACTTACAAGGGCTTAGAATGCAACTCCAGTTGCTGAAGTTAGAATCTGAAGAACATGTGGAGGGACCTATGCAAATTTCAAGTGATGAAGATGGTGTGGAAGCATATGCTGAAATGTTAGAAGAAAATGCATTACGGAGAACTGAAGATAGCTGGGAGTCTTCTTACATTATTGATGTCTTGTCTGAATCTGCCATCGATAAGGGTCAAACTCATAATATTTTGGAAGTTTGGCATTCTCTAGAATGCCCTGTTAGTCTGTCTGTATTTGAAAAACTTGAAGAAGAGAGGTACAGTGATTGGATTATTTGTTCAAGGTCTGAAAGGAGAATGCTTTTCGACCGCATCAATTCAGGAATTGTCAAAATTCACGAGCAATCTGCTGACCCACAACCATGGGTGGGTAATGCAGGCAAAACTTTTGGATCAAAAAGGTTTACTGGGCTCCAAGATGGTATTTTCCAGATGCTAGGGAGCCAAGGAAAGGTAGAGGATGATGCCCTGGGTAAGTTGCTGGTTGTGGAGTCTCAATGGTTGAGTTTGAGAGATGACATTGATGTAATAGGAAGAGAAGTTGAGATATTGATATTAGATGATTTAGTGGCAGAAATAGTTGGTATCTAA | 2874 | 0.4168 | MDKIKIKSHRTNSKLHLPQGKDQIHKQLHHQDLSPDSSSSSGGVGDKDSFSFKFGWKSSKQSVGTPIKKLLAEEMSPMTETKRRPPGVIARLMGLDGLPSQHLHKSVPLEKTQSRGLSNEGRSSRRSSRDQEEFKDVFEVSEIPKVESGRHSSSDFKAHEDEMSFIEQKFMNAKRLATYQDYQSSKEFHETLEVLDSNKDLLLKYLKQPDSLFKKHLNDLQGSPFQSHSGHVAPPNMENFDHGLNWRSDKEAQHVNYNRFHQKHSDDYHNQFDKRRVMQNPPRSSKHRFKGSREQSAVATKIVVLKPNLGKLQNGTKIQSSPCSPHNFLSEHGNQVEFSDVRFRDAELYKKINLPDSARSFRHNSLESTEIAKEVTRQMKNSLSRGCMMSSSSRFKGCTRSDSSSSASGNESPEEITAPIGDPFDLSKRSRRSPRSNESSVSREAKKRLSERWKMAHKSQEVQGSSRSSTLADMLAFPGKKGTRFDSMANGGGFYDKFARNGEPSGWVEPLGISSKDGWRDASIGSLSRSKSLPASSTVFGNARTFMCAEALRNDRYMGPKDLKRERRRATMSLDHRHGLNSRSTISGHKKSWSLLSSKQEVNEFSPDLNAVENNIMINLEEDSPNLEVHSPETFGQRLRNTSVVSDDVVDVANGNTDGSFEPSSDKVLPGTSSCVLIKGDSSGVEDNSIQEEVSAGSTGGISVLSEAPAPGLESPCCKDADQPSPISVLDPSFTDDVSSCSECFGSVSADLQGLRMQLQLLKLESEEHVEGPMQISSDEDGVEAYAEMLEENALRRTEDSWESSYIIDVLSESAIDKGQTHNILEVWHSLECPVSLSVFEKLEEERYSDWIICSRSERRMLFDRINSGIVKIHEQSADPQPWVGNAGKTFGSKRFTGLQDGIFQMLGSQGKVEDDALGKLLVVESQWLSLRDDIDVIGREVEILILDDLVAEIVGI | 957 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi932g00012 | 957 | MobiDBLite | consensus disorder prediction | 122 | 141 | - | - | |
| Vivi932g00012 | 957 | Pfam | DUF761-associated sequence motif | 81 | 102 | IPR032795 | - | |
| Vivi932g00012 | 957 | MobiDBLite | consensus disorder prediction | 99 | 141 | - | - | |
| Vivi932g00012 | 957 | Pfam | Protein of unknown function (DUF3741) | 167 | 211 | IPR022212 | - | |
| Vivi932g00012 | 957 | MobiDBLite | consensus disorder prediction | 58 | 87 | - | - | |
| Vivi932g00012 | 957 | Pfam | Domain of unknown function (DUF4378) | 804 | 953 | IPR025486 | - | |
| Vivi932g00012 | 957 | MobiDBLite | consensus disorder prediction | 382 | 469 | - | - | |
| Vivi932g00012 | 957 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - | |
| Vivi932g00012 | 957 | PANTHER | AFADIN | 30 | 955 | - | - | |
| Vivi932g00012 | 957 | MobiDBLite | consensus disorder prediction | 15 | 32 | - | - | |
| Vivi932g00012 | 957 | MobiDBLite | consensus disorder prediction | 425 | 458 | - | - | |
| Vivi932g00012 | 957 | MobiDBLite | consensus disorder prediction | 382 | 413 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vivi932g00012 | 63 | 955 | TRM (TON1 Recruiting Motif) Superfamily | AT3G53540 | 35.729 | 5.57e-121 | 390 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi932g00012 | - | - | ccaj:109788117 | 1113.98 |