Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi930g00013 ATGCTTAGCAATACCAGCCAGGTTGATTTAGATGACATAGATGAAATTAAGTTTCCTAAGGTGCAAGACTTGCAATTTGTAGACTGCATTTTAGAGGAATGTGAAAAGTTATACATCTCGACAAAGCGGTGGCACTATGTGCGGTCTTTAACTACCAATTTTTCAGTTGGCTTTTGGAAGAGAATTAAGATAATATCAAACAGATGGGCTGCAATGGATGATTTCTTTGTTAAATATCAACTTAATGGGATTTTGGCTGATGAAATGGGGCTTGGGAAAACAATACAAATTGTTTCTCATAGCACATCTTTTGGAATACAAAGGTGTGATTGGTCCCCACTTGATTGTTGCTCAAGGAAGTTCTACCAAACTGGATCATTGAATTCTCAACATGGGGTCCTAGGGCTTGTGAAAACATCCCAATTATTCTATGTGGAAATAAGGTTGATGTGA 453 0.3753 MLSNTSQVDLDDIDEIKFPKVQDLQFVDCILEECEKLYISTKRWHYVRSLTTNFSVGFWKRIKIISNRWAAMDDFFVKYQLNGILADEMGLGKTIQIVSHSTSFGIQRCDWSPLDCCSRKFYQTGSLNSQHGVLGLVKTSQLFYVEIRLM 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi930g00013 150 Gene3D - 65 117 IPR038718 -
Vivi930g00013 150 SUPERFAMILY Clavaminate synthase-like 2 72 - -
Vivi930g00013 150 Gene3D Jelly Rolls 1 62 IPR014710 -
Vivi930g00013 150 Pfam SNF2-related domain 78 100 IPR000330 GO:0005524|GO:0140658
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Vivi930g00013 SNF2_N 4.7e-06 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi930g00013 K24444 - vvo:131638039 311.227