Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi930g00009 ATGGATTGTTGTGTGTGCACAACTATGCCATTAATATTAAGGCCTCCAAGGAATACAATATGTGGAGCATGCTATGAAGGAGTTAGGACCATAATCAACATGATGAACGGTTTTGAAAGTGAGAAAGCAAAAACAATCACTAGTCCAGTTGATTCTCCGGTTTCGTGGCGAAATTCGAGTAAGACACTTGATGATTGCATAAGATTGTGTTCAGAGCAAATAGAACAGTTTAATCAACAAAAACAAGATTTGGTTTTTCTCAGAGGCTTTCTTGCTGCATTCAAAGAACAAATTCATACAGATATATTGATTAGTCCAGGCAATCATGGTCCACCTATTCCTGCACATAAATCCGTTTTGGCTGCAAGATCAGAAATTTTCAAGAACATGCTAGAGTGTGATGAATGTAAAGCTGCACCAACTTGCAACACAATAACTATACCTGATTTAAACCATGAAGAGCTAGAATCTCTATTAGAATTTCTCTACAGTGGAACACTGCCTTTGGAAAAATTGGAGAAACATGTGTATGCTTTGTCCCAAGCAGCTGATAAGTACATTATTCCACATTTGTTGAAATACTGTGAAAGATTCTTGCTTAACTCACTAAGCACTTGTAATGCATTTGAGACACTAGAGGTTGCTGATAGTTGTTCAAACCAAAATTTGAAGGAGACAGCTTTTAATTTCTTAGTTAAGAATATTGAGTTTATGGTTTCTTCTCCTAAATTTGAAGCTTTTGTGCATAGGTGTCCACATTTGACTGTGCAGCTAGTTTCAAGGGCATTTATGAATGGTTCCAAATAA 807 0.3643 MDCCVCTTMPLILRPPRNTICGACYEGVRTIINMMNGFESEKAKTITSPVDSPVSWRNSSKTLDDCIRLCSEQIEQFNQQKQDLVFLRGFLAAFKEQIHTDILISPGNHGPPIPAHKSVLAARSEIFKNMLECDECKAAPTCNTITIPDLNHEELESLLEFLYSGTLPLEKLEKHVYALSQAADKYIIPHLLKYCERFLLNSLSTCNAFETLEVADSCSNQNLKETAFNFLVKNIEFMVSSPKFEAFVHRCPHLTVQLVSRAFMNGSK 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi930g00009 268 SMART BTB_4 100 203 IPR000210 GO:0005515
Vivi930g00009 268 Pfam BTB/POZ domain 94 202 IPR000210 GO:0005515
Vivi930g00009 268 Gene3D Potassium Channel Kv1.1; Chain A 67 204 IPR011333 -
Vivi930g00009 268 SUPERFAMILY POZ domain 86 201 IPR011333 -
Vivi930g00009 268 CDD BACK 204 244 - -
Vivi930g00009 268 ProSiteProfiles BTB domain profile. 100 171 IPR000210 GO:0005515
Vivi930g00009 268 Gene3D - 205 267 - -
Vivi930g00009 268 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 20 265 IPR044784 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vivi930g00009 BTB 1.5e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi930g00009 K10523 - gmx:100777561 452.595