Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi925g00013 ATGAAACTCTTCTTCCTCTTCCGCATTTCCTTCCTCCTCTTCCTCCTCAACCAACACTCCTCCGTCAACGCCGTTTCTCCCACATCACGTTCCCTTCTCTCCCTTCCTCCTAAGGCAGAAACAGCGCTGATTGCTACGTTAGACGGGACGTTGTATTTAATGGACAGTCAGGAGGATGGTTCCATGAGGGTGATATGGTCGTTCTCGACGGGATCACCGATATACAGTTCGTATCAAGCTCCTGTAAACAAGGACTGTTGTAGAGAAAATAATGAATCTGCAGCAGCACCAGCACCAGCACCGGTTAGCGGGTTCGTGGAGTGTGGGGATGATTGGTCTTTGTATATGCATGACAAGCACTTTGGTAAAATGAGAATCTCAGAGTCTATTGCAGAATTTGTACTTCGTACACCTACAATTTCGGATGATGGAGCTGTTATACTAGGATCCAAAGAAATCAGTTTATTTGAAGTAGATGCTAAAACTGGATCGATCATTCAAATCCACGCCAAGTCTGATCCTAATAATGTTTTTGCACCTTTGAGTGATGCTAGGAAGAGAGTTAGAAATATCATGAGTGCAGATCATAAAGATCTAGCTGATCCTAAGAAGCTAAATTCATCCCAGACGCTGCTCAAGATTTTTAGGACAGATTATTCTCTGCGGTCTGTTAGCCCCAACTCGGGAAGAGTATTGTGGAATTTGACAGTAGCTGAATTCGAGGCTGTATTATTATGCCAACATACTACATTTGATGTAGAGGATGGATATCTTTCTGACAGTGGACTCAATTTTGCGATGCCTTACCCATGTCAAGAGATGCAAAACGTCTTCCGCGTGAAAAAAAAATTTCTGTTAGAATCTTTAATCACTGAAAGTGTACACGGGGCTTTTAATGAAAGTGATATACTCTCAGTGGCTGCCTCAGATCTGATGATTCCATTGCAACCCAGTATTGATAGACTCCCTCAGCCTCTCATTGAGGTTACTTCACCGGGTGATGTTTATTTGCACAAGAAGAGTGGATGGTCAACTCCATTACCTAGTATGTTGTTTACGGTTTTTCTTTTGGTGTCGGGCTTTTCACTCATCATCTTTCTTCTGGTGAAAGTGATTAAGAATCAAGATATACCAAAGGACCAAAATAAAGACTCTGAATTGAAAAATTCACCTGCCAAGAGAAAGAAAACACACAAGTCAGGAAAGAACCGTGGCACTAATGATAAAATGGAAAAACATCTTATTTCAGAAGATGATGCACTGACACCAAAAGATGCTAATGGAGAAGCATGGAAGAACTTAAATCAAGCTGAAGAAGGTGTTGATGGACGAAGAATTGGTAAGTTATTCGTTTCAAATGAAGAGATTGCTAAGGGAAGCAATGGTACCATTGTCCTTGATGGAAGATATGAAGGCCGACCGGTTGCAGTCAAGCGTCTTGTCAAAACTCATCATAGTGTAGCCTATAAAGAAATCCAAAACCTCATTGTGTCTGACCGTCATCCAAACATTGTCAGATGGCATGGGGTGGAGTATGATCAAGATTTTATTTACCTTGCACTGGAACGCTGTACTTGCAACTTAGACGACTTGATTCAAATTTATTCAGATATATCAGAAGATTCCATTTTTAGGAAGGACCAAGCACTCGAATTGATAAAAGGAAAAATGGAGACAGGAAAGCATGATACACAGTATCTTTGGAAAGAAAATGGCTATCCATCACCTCTGTTACTGAAATTGATGAGAGATATTGTTTCCGGGGTTGTTCATTTGCATGAACTAGGAATAATACATCGAGATTTGAAACCCCAAAATGTTCTAATAAACAAGGAAAAATCCCTATGTGCGAAGCTTTCTGACATGGGCATTAGCAAACGACTTCTTGAAAATATGTCCTCTTTGGGTCATAATGCTACTGGTGGGGGCAGTTCAGGTTGGCAAGCCCCAGAACAGCTTGATCAAGGACGTCAAACACGAGCTGTAGATATATTCAGTTTAGGTTGTGTTCTTTTTTTCTGTATGACTGGGGGAAGACATCCATTTGGACAAAATCTTGAACGTGACATCAATATTGTGAAAAATCAAAAGAATTTATTCTTAGTTCAGTTCATTCCGGAAGCTGAGGATCTTATTAGCTGTTTATTAAACCATGAACCTGATCTAAGGCCGAAAGCGATTGAAGTATTGCACCATCCTTTTTTTTGGAGTCCCGACACAAGACTTTCATTTTTACGTGACACCAGTGACAGGGTGGAACTGGAAGATAGAGAGATTAGTTCTAATCTTTTGCGGGCTTTAGAAAGCATTGCTACAACAGCCTTAGGTGGTAAATGGGATGAAAAGATGGAACCAACTTTCATTGCTAACATTGGTCGTTACCGGCGCTATAAGTTTAACAGTGTTCGAGACTTGTTGCGCGTTATGAGAAACAAGCTAAATCATTATGGAGAATTGCCACAAGAAATCCAGGAACTAGTTGGACCTGTTCCTGAAGGATACAATGACTACTTTGCAAACCGATTCCCAAGACTCTTGATTGAAGTGTATAATGTCATATGCAAGCACTGCAAGGAGGAAGAGTGTTTTCAAAGGTATTTTAAAAATGATGATTAG 2616 0.4056 MKLFFLFRISFLLFLLNQHSSVNAVSPTSRSLLSLPPKAETALIATLDGTLYLMDSQEDGSMRVIWSFSTGSPIYSSYQAPVNKDCCRENNESAAAPAPAPVSGFVECGDDWSLYMHDKHFGKMRISESIAEFVLRTPTISDDGAVILGSKEISLFEVDAKTGSIIQIHAKSDPNNVFAPLSDARKRVRNIMSADHKDLADPKKLNSSQTLLKIFRTDYSLRSVSPNSGRVLWNLTVAEFEAVLLCQHTTFDVEDGYLSDSGLNFAMPYPCQEMQNVFRVKKKFLLESLITESVHGAFNESDILSVAASDLMIPLQPSIDRLPQPLIEVTSPGDVYLHKKSGWSTPLPSMLFTVFLLVSGFSLIIFLLVKVIKNQDIPKDQNKDSELKNSPAKRKKTHKSGKNRGTNDKMEKHLISEDDALTPKDANGEAWKNLNQAEEGVDGRRIGKLFVSNEEIAKGSNGTIVLDGRYEGRPVAVKRLVKTHHSVAYKEIQNLIVSDRHPNIVRWHGVEYDQDFIYLALERCTCNLDDLIQIYSDISEDSIFRKDQALELIKGKMETGKHDTQYLWKENGYPSPLLLKLMRDIVSGVVHLHELGIIHRDLKPQNVLINKEKSLCAKLSDMGISKRLLENMSSLGHNATGGGSSGWQAPEQLDQGRQTRAVDIFSLGCVLFFCMTGGRHPFGQNLERDINIVKNQKNLFLVQFIPEAEDLISCLLNHEPDLRPKAIEVLHHPFFWSPDTRLSFLRDTSDRVELEDREISSNLLRALESIATTALGGKWDEKMEPTFIANIGRYRRYKFNSVRDLLRVMRNKLNHYGELPQEIQELVGPVPEGYNDYFANRFPRLLIEVYNVICKHCKEEECFQRYFKNDD 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi925g00013 871 ProSiteProfiles KEN domain profile. 738 869 IPR010513 GO:0004540|GO:0006397
Vivi925g00013 871 ProSiteProfiles Protein kinase domain profile. 450 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi925g00013 871 SMART serkin_6 450 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi925g00013 871 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 442 522 - -
Vivi925g00013 871 CDD RNase_Ire1 741 867 - -
Vivi925g00013 871 Gene3D Phosphorylase Kinase; domain 1 437 522 - -
Vivi925g00013 871 SUPERFAMILY Protein kinase-like (PK-like) 450 740 IPR011009 -
Vivi925g00013 871 Gene3D KEN domain 739 871 IPR038357 -
Vivi925g00013 871 PANTHER IRE1-RELATED 125 870 IPR045133 GO:0004521|GO:0004674|GO:0030968
Vivi925g00013 871 Gene3D Transferase(Phosphotransferase) domain 1 560 737 - -
Vivi925g00013 871 Gene3D - 28 263 IPR015943 GO:0005515
Vivi925g00013 871 SMART PGNneu 800 854 - -
Vivi925g00013 871 MobiDBLite consensus disorder prediction 379 414 - -
Vivi925g00013 871 Pfam Protein kinase domain 452 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi925g00013 871 ProSitePatterns Serine/Threonine protein kinases active-site signature. 597 609 IPR008271 GO:0004672|GO:0006468
Vivi925g00013 871 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 739 871 - -
Vivi925g00013 871 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 42 237 IPR011047 -
Vivi925g00013 871 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 560 737 - -
Vivi925g00013 871 Pfam Ribonuclease 2-5A 741 867 IPR010513 GO:0004540|GO:0006397
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi925g00013 450 735 MAP Kinase Kinase Gene Family AT1G51660 27.907 4.78e-21 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Vivi925g00013 Pkinase 3.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi925g00013 K08852 - gmx:100788389 1229.16