Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi925g00007 ATGACTCGCTCTCTTAGAACATTACAATCCATTTCCTCCGCCGCACCTCCGCCCGACTCCACCGCCTCTTTAGAATCCGACTTCGTCGTCATCCTCGCCGCTCTCCTCTGCGCTCTCATTTCCGTCGTCGGCCTCACCGCCATCGCCCGATGCGCTTGGCTCCGCCGCGGCCCCGCCGCCGGAGCCTCCCCGACCACCGCCGTTGTCAACAAAGGTCTCAAAAAGAAAGTTCTCAATTCACTTCCCAAATTCACCTACCTCGGCGACACTCCCGGAAAATGGATAGTCTCGTCGGAGTGCGCCATTTGTCTCTCGGAGTTCACCGCCGGCGAAGAGGTTAGAGTGCTTCCCCAGTGCGGTCACGGCTTCCACGTGGCGTGTGTAGACACGTGGCTTGGGTCTCACTCCTCGTGTCCTTCTTGCCGTGCTCCTTTCGCCGTCGCTAGGTGTCAGAAATGCGGCCTATACCAACCAAATCCTGCCGGAGAAGTCACTGGAGAAGTCACCGGAGAAACAGAGCCGAAAACCACCGGCGACAGGAATGTAGAAGTTGTTGTTGTGAATTCCAATTGTGTTAGCGACGGCGTTGATAGACATAGCCACGGTGGTTATAATGGCTTTTTGCCGTAA 630 0.5651 MTRSLRTLQSISSAAPPPDSTASLESDFVVILAALLCALISVVGLTAIARCAWLRRGPAAGASPTTAVVNKGLKKKVLNSLPKFTYLGDTPGKWIVSSECAICLSEFTAGEEVRVLPQCGHGFHVACVDTWLGSHSSCPSCRAPFAVARCQKCGLYQPNPAGEVTGEVTGETEPKTTGDRNVEVVVVNSNCVSDGVDRHSHGGYNGFLP 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi925g00007 209 ProSiteProfiles Zinc finger RING-type profile. 100 142 IPR001841 -
Vivi925g00007 209 MobiDBLite consensus disorder prediction 1 20 - -
Vivi925g00007 209 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 14 154 - -
Vivi925g00007 209 SMART ring_2 100 141 IPR001841 -
Vivi925g00007 209 MobiDBLite consensus disorder prediction 1 22 - -
Vivi925g00007 209 Pfam Ring finger domain 99 142 IPR001841 -
Vivi925g00007 209 CDD RING-H2_EL5-like 99 142 - -
Vivi925g00007 209 SUPERFAMILY RING/U-box 99 147 - -
Vivi925g00007 209 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 147 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi925g00007 1 153 C3H Transcription Factor Family AT1G20823 59.036 1.50e-58 181