Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi925g00004 ATGTCTCGTGTTGAGATCATTGATCTTACAAACTCTCATGATTCCTCTCCATCACCACACATATCTTCTTCTAATGTACAATCGATTCTTAACTTTGGTCATGTTTCTACCAATCCTAATCTTCACAATCATATACATCACCATCAACACCAAACTAATGTGTGGGTCTCACCACCACAAGAATTCAGGGTCCCACCACCATCTGGATTCAACAATAACACCTCCCAGATTGCTACTATGCCCCAAGTTGGTATGCACGGTGGTAGCCCAATTGCGAGGGTTCTCCAACCTGAACCAAATACCTTCCCATATTCAAATGGAGTTAGGTCAAGGGTCACTTGGTCTCAAGAAGAACATGACTTATTTGTGATGGGGCTGATTGAATATGGAAAAGGGAAATGGAGCAAAATAGCAAAGCACTATGTTTGCAACAAGACACCACAACAAGTTCAATCCTATGCACGTAGCTTCTTCAAGCATCTACCACCTTCATATGTGCATGGTTTTAGAAGAAAGAAATCAACTTCAAATCTCAACAACTCTGTCTCTAGAAGAAATGAGGAAACTCTAGCACTTCCAAAGAAAGCTTATAGAGGAGAATCTAGCACTTCCATTACTGTGCCTAGTGTTTCTGCTGATAATGGAGAAGTTGATCTGAAACTTCGTTTGAGTTTATACAAGTGA 684 0.405 MSRVEIIDLTNSHDSSPSPHISSSNVQSILNFGHVSTNPNLHNHIHHHQHQTNVWVSPPQEFRVPPPSGFNNNTSQIATMPQVGMHGGSPIARVLQPEPNTFPYSNGVRSRVTWSQEEHDLFVMGLIEYGKGKWSKIAKHYVCNKTPQQVQSYARSFFKHLPPSYVHGFRRKKSTSNLNNSVSRRNEETLALPKKAYRGESSTSITVPSVSADNGEVDLKLRLSLYK 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi925g00004 227 CDD SANT 113 158 IPR001005 -
Vivi925g00004 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 111 162 IPR017930 -
Vivi925g00004 227 ProSiteProfiles SANT domain profile. 109 162 IPR017884 -
Vivi925g00004 227 MobiDBLite consensus disorder prediction 172 187 - -
Vivi925g00004 227 Pfam Myb-like DNA-binding domain 111 156 IPR001005 -
Vivi925g00004 227 NCBIfam myb-like DNA-binding domain, SHAQKYF class 110 160 IPR006447 GO:0003677
Vivi925g00004 227 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 106 174 IPR043363 -
Vivi925g00004 227 MobiDBLite consensus disorder prediction 172 195 - -
Vivi925g00004 227 MobiDBLite consensus disorder prediction 1 24 - -
Vivi925g00004 227 SMART sant 110 160 IPR001005 -
Vivi925g00004 227 ProSiteProfiles Myb-like domain profile. 106 158 IPR001005 -
Vivi925g00004 227 SUPERFAMILY Homeodomain-like 109 159 IPR009057 -
Vivi925g00004 227 Gene3D - 112 162 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vivi925g00004 Myb_DNA-binding 9.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi925g00004 - - vvo:131637979 241.121