Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi925g00003 ATGCCCCAACATGGTATGCACGGTGGTAGCCTAATTGCGATTCTCCAACCGTTACCTGGACCAAATAACTTCCCATATTCAAATGGAGTTAGGCCGAGGATCCCTTGGTCTCAAGAAGAACATGACTTATTTGTGATGGGGCTGATTGAATATGGAAAAGCGAAATGGAGCAAAATAGCAAAACACTATGTTTGCCACAAGACACCACAACAAGTTCAATCCTATGCACGTAGCTTATTCAAACATCTACCAGCTTCATATGTGCATGGTTTTAGAAGAAAGAAACCAACTTCAAATCCCAAAAAATTTGTTTCTACAAGAAACAACGAAACTCTCAATCATTTTCCAAAGAAAGCTTATAGAGGTGAATCTAGCACTTCCATGACTGTGCCTAGTGTTTCTGCTGATAATGGAGAAGTTGATGTGAAACTTCGTTTGAGTTTATATAAGTGA 453 0.3929 MPQHGMHGGSLIAILQPLPGPNNFPYSNGVRPRIPWSQEEHDLFVMGLIEYGKAKWSKIAKHYVCHKTPQQVQSYARSLFKHLPASYVHGFRRKKPTSNPKKFVSTRNNETLNHFPKKAYRGESSTSMTVPSVSADNGEVDVKLRLSLYK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi925g00003 150 Gene3D - 34 84 - -
Vivi925g00003 150 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 31 98 IPR043363 -
Vivi925g00003 150 NCBIfam myb-like DNA-binding domain, SHAQKYF class 32 82 IPR006447 GO:0003677
Vivi925g00003 150 ProSiteProfiles SANT domain profile. 36 84 IPR017884 -
Vivi925g00003 150 SUPERFAMILY Homeodomain-like 31 81 IPR009057 -
Vivi925g00003 150 Pfam Myb-like DNA-binding domain 35 79 IPR001005 -
Vivi925g00003 150 SMART sant 32 82 IPR001005 -
Vivi925g00003 150 CDD SANT 35 80 IPR001005 -
Vivi925g00003 150 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 84 IPR017930 -
Vivi925g00003 150 ProSiteProfiles Myb-like domain profile. 33 80 IPR001005 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vivi925g00003 Myb_DNA-binding 1.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi925g00003 - - vvo:131637979 316.235