Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi922g00012 ATGTGTAGTAGTATCTTTGTGTCATCAACAACAAGTATGGACAATTACCAAGGTGATTTAACTGACATAATCAGAGCTACTGGTACTGGAGCTGGAGCATATAGTACAATCACTTCATCATCATCTTCTGAACCTCTCTTACAACATCATCATGATGATAATCAGTGGCATCCTCATCATCAACATCATCAGCATCATCAACCTATGAGTTTCTCTAATTCTATTCTTGAAGACAACAGATCAGGATCAACAAACAACATCAACATGAACATGAACATGAACATCTTTGGTGATCCATTATTCTCAACTTTAAGAGATCCATTTCTACAAGAGCTTGATCATATACCTTCTTCTTCCTACTTCAACATCCCAACTAGTAGTATAATTGATGTTGCAGCAGCTTCTGGTGTTAGCGTTACTACTTCATCATCTTCTTCTCTTTCTGCTTCTGCTTCTGTTTTTGCACTTGATCAAGATCATCATCATAATCATAATCATCATGAGATGATGAGATCAGGTTCAAGGCCATGTAAGAACATATTCTCAAACATGATTCAGATCTCTCCTAATGCAACAAAGCTATCAAATTATGAATCTTCTTCTTCCACCATGGCACCTTCTCCAAGGCAAATTAAACCTGTTGTTGCTGTTTCAACCAACATCAATATTAATGCTAAGGATTCTCTTCTAGACAACACAGGATCAGGAACAGTTCAGATCTCATCTTCAAGGAATAATACAGGCCTTAAACGAAGAAAGAATCAGGCAAAAAAGGTGGTTTGTATTCCTGCACCAGCAGCTGCAAACAGTAGACAAACTGGTGAAGTTGTTCCTTCAGATTTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATTAAAGGTTCACCTTATCCAAGGGGTTATTACAGATGCAGCAGTTCAAAGGGTTGTTCGGCAAGGAAACAAGTTGAGAGAAGCAGAACAGATCCAAACATGTTAGTTATAACCTACACTTCAGAACACAATCATCCATGGCCAACACAAAGAAATGCTTTAGCAGGTTCAACAAGATCTCAACCCTCCAAAAACAGCACTTCCATGAAAAGCTCAGAAACTTCATCTCAACCACAAACTGACACAACAACAACAACAACAACAACAACAACAAAGACAAAAGAAGAACAACATCAAGAGAGTGATGGAAATGGAAATGATTCACCAGTTGTTAACAGTGTGAAGGAAGAGAGTATGGAAGATATAGAGAAGTTGCAAATTGAGATGGATGAAGGAGTAGAATTCAATGATGCACTTTCTTATAAGCCTTGTTTGATGGAAAATAATCAAAGTCATGAGGATTTTTTTGCTGAGTTAGGTGAAATTGAAGCTGATCCATTAGACCTATTGTTTAATCAAGGTTTTGGTGGTAATTCAAGCAATGATATTATTCATCAAAGAGATCATCAATCCAAGAGTTTAGATGCATTTCATCTCTTTGACTGGTCAGGTGACAACAACAACAACAACAACAACAACAATAATGCCAACAACTCATTTGAAGAACCAAATAAAAGAAGGTTATTATGA 1563 0.3711 MCSSIFVSSTTSMDNYQGDLTDIIRATGTGAGAYSTITSSSSSEPLLQHHHDDNQWHPHHQHHQHHQPMSFSNSILEDNRSGSTNNINMNMNMNIFGDPLFSTLRDPFLQELDHIPSSSYFNIPTSSIIDVAAASGVSVTTSSSSSLSASASVFALDQDHHHNHNHHEMMRSGSRPCKNIFSNMIQISPNATKLSNYESSSSTMAPSPRQIKPVVAVSTNININAKDSLLDNTGSGTVQISSSRNNTGLKRRKNQAKKVVCIPAPAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNSTSMKSSETSSQPQTDTTTTTTTTTTKTKEEQHQESDGNGNDSPVVNSVKEESMEDIEKLQIEMDEGVEFNDALSYKPCLMENNQSHEDFFAELGEIEADPLDLLFNQGFGGNSSNDIIHQRDHQSKSLDAFHLFDWSGDNNNNNNNNNNANNSFEEPNKRRLL 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi922g00012 520 SUPERFAMILY WRKY DNA-binding domain 276 339 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi922g00012 520 MobiDBLite consensus disorder prediction 496 513 - -
Vivi922g00012 520 Pfam WRKY DNA -binding domain 280 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi922g00012 520 MobiDBLite consensus disorder prediction 67 84 - -
Vivi922g00012 520 FunFam probable WRKY transcription factor 14 252 332 - -
Vivi922g00012 520 MobiDBLite consensus disorder prediction 35 84 - -
Vivi922g00012 520 MobiDBLite consensus disorder prediction 496 520 - -
Vivi922g00012 520 MobiDBLite consensus disorder prediction 234 249 - -
Vivi922g00012 520 Gene3D WRKY domain 252 332 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi922g00012 520 MobiDBLite consensus disorder prediction 295 411 - -
Vivi922g00012 520 ProSiteProfiles WRKY domain profile. 273 339 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi922g00012 520 MobiDBLite consensus disorder prediction 234 254 - -
Vivi922g00012 520 MobiDBLite consensus disorder prediction 322 383 - -
Vivi922g00012 520 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 19 462 IPR044810 GO:0003700
Vivi922g00012 520 SMART WRKY_cls 278 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi922g00012 1 507 WRKY Transcription Factor Family AT1G30650 40.153 6.76e-94 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi922g00012 WRKY 3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi922g00012 - - gmx:100805707 483.026