Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi922g00010 ATGCAGCATAGGAAAATTGTTAGGTTACAGGATGTAGTGCACAGTGAGAAGCGATTGTATCTGGTTTTCGAGTATCTGGACTTAGATCTGAAGAAGCATATGGATTCATCTCCCGAGTTCATAAAAGATCCTCGACAAGTAAAAATGTTCCTTTATCAAATGCTCTGTGGAATTGCTTACTGTCATTCACATAGAGTTCTTCACCGAGACTTGAAACCACAGAATTTGTTGATAGATCGCCGTACTAATTCTCTAAAGCTTGCAGATTTTGGATTGGCTAGGGCGTTTGGCATTCCTGTCAGAACATTTACACACGAGGTAGTTACACTGTGGTACCGAGCTCCAGAAATATTGCTTGGATCTCGTCATTATTCAACCCCAGTCGATGTTTGGTCAGTGGGATGTATATTTGCAGAGATGTCAAACCGACGACCTCTATTTCCTGGGGATTCCGAGATTGACGAATTGTTTAAAATATTCAGAATCTTGGGTACCCCGAACGAAGATACATGGCCAGGAGTAACTTCATTGCCTGATTTTAAATCAACATTTCCCAGGTGGCCAGCTAAGGACCTAGCCGCCGTGGTTCCAAATCTTGAGCCAGCTGGTCTTGATCTTATTTCTAGCATGCTTTGCTTGGACCCCAGCAAAAGAATCACCGCCAGGAGCGCAGTGGAACATGAATACTTCAAAGACATTAAATTTGTACCCTAA 714 0.4272 MQHRKIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFIKDPRQVKMFLYQMLCGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMSNRRPLFPGDSEIDELFKIFRILGTPNEDTWPGVTSLPDFKSTFPRWPAKDLAAVVPNLEPAGLDLISSMLCLDPSKRITARSAVEHEYFKDIKFVP 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi922g00010 237 FunFam Cell division control protein 2 homolog 29 235 - -
Vivi922g00010 237 ProSiteProfiles Protein kinase domain profile. 1 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi922g00010 237 Gene3D Phosphorylase Kinase; domain 1 1 27 - -
Vivi922g00010 237 ProSitePatterns Serine/Threonine protein kinases active-site signature. 66 78 IPR008271 GO:0004672|GO:0006468
Vivi922g00010 237 Pfam Protein kinase domain 1 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi922g00010 237 Gene3D Transferase(Phosphotransferase) domain 1 29 235 - -
Vivi922g00010 237 SUPERFAMILY Protein kinase-like (PK-like) 2 233 IPR011009 -
Vivi922g00010 237 PANTHER CELL DIVISION PROTEIN KINASE 2 230 - -
Vivi922g00010 237 SMART serkin_6 2 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi922g00010 1 237 Core Cell Cycle Gene Families AT3G48750 79.747 1.47e-145 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Vivi922g00010 Pkinase 2.4e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi922g00010 K02206 - gmx:100782865 471.855