Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi921g00003 ATGTCTAGGGCTCCCATTCTCATTAAGGAGCTGGTCCAAGGGAACCAGGTGTGGAAAATGCACATCAGGGTCGTTGACATGTGGGTTGTTACAGAAAAAACAGGGTATCAACACCTAGAGTGTGTTCTACAAGATGGAACGGGTGACCAAATCCATGTGACCACTAGCCGTTGGGATTTCAAAGATTGGATAGAGCAGATCAAAGAGCATGAAACTTATTATCTGTATAATGGGGAGCCCGTGGTTAATGATGGCCCTTTGAAAGTATGTTCGAACCCTCTCAAGATTCTTTTTAATGGAGGGACTACTCTCACCAAGGTGGACATACCGGACATCCCACCACACAAATTCAACTTCCATGCCATTGAAAACTTTCTCAATGGACATTTCAAGCCTGATATGCTCTATGATGTTATTGGTGTCTTGCAAGATGTTGTTAAGACACAAATGGGGGGTGGGGGTAAGAAGTCCTGTACCAATATCACATTACGTGACGTTGTAGGAAATGCCATTGAAGTTGCTTTATGGGGTGATTTTAGCAAACAATTCATGGACTACAAGACTCTTGGCAAACATGTTGGTCCCACAATTATCATTTTGACTCATGCTTGGTGTAAGCCCAATACAGTATCTGGATTACCAAGTCTATCTAATGCTTGGAATGGCTCGAAACTACTGATTAACTTAGACCATCCACAAGTGGAAACCTTCAAAACCAGTTTTGGAGCAGCTGATTTCTCAAATGCATCCAACCTTTCTCTATCACTAACTTGTGATTCATCCATTCAATCCACAAACCAGAATTGGACTAGCCGTAATGAGGTCAGGACTATCCGTGACATTTATGAAGGAGAAAAGGATTGTTTTGCAACTACTATTGGAACTACCAAACGATTCAAGGCTTCAAGGTTTGGATGGTTTTTTGAGTGCTGCCCAGGATGTAAGATTTCTATCAAGACCGTTGGAGGGAAAGTTCAGTGCCACTGTGGAGTTAAAGATGATAAGGATTGTGTCCCATATACTAAACTGTCTGCTAAAGAGTTAAGAAAGCTCATGATAGCGAATGGAGAAGACAACCCAAAAATATGGCCGGCTCAAGTTGACAATTTGTTGAATAAGGAAATGGCGTTCCGTATCAAATTTCAATCATCTTACAAACAGTATTCAATTGTGACAATTCTTAATGAGGATAATGTTTACAACAAACTTAAGGGCTACCTAACCCTGGATGAGGAGCATACATCAAATGCTCCTGTTTTGGAGATCTCCAATTCTGATCCAAATCATGAGCCAACTGAACCTATTATGACACTTTCTGCTCAAGCTTCGATATCTCCTCAACCTTCGTCTGCAAGCTCCGGCAGCACACCTGCCAAGAGGGGAGCTATTTCAACATCAGTTAATGAGTTGATTGAGGCTGAAGATCTGACTCCTAAACAATCTGCTACTAAGGCTAAGACTACAAGAAAGATCAAGCATATCAAGATGGAGTAA 1494 0.415 MSRAPILIKELVQGNQVWKMHIRVVDMWVVTEKTGYQHLECVLQDGTGDQIHVTTSRWDFKDWIEQIKEHETYYLYNGEPVVNDGPLKVCSNPLKILFNGGTTLTKVDIPDIPPHKFNFHAIENFLNGHFKPDMLYDVIGVLQDVVKTQMGGGGKKSCTNITLRDVVGNAIEVALWGDFSKQFMDYKTLGKHVGPTIIILTHAWCKPNTVSGLPSLSNAWNGSKLLINLDHPQVETFKTSFGAADFSNASNLSLSLTCDSSIQSTNQNWTSRNEVRTIRDIYEGEKDCFATTIGTTKRFKASRFGWFFECCPGCKISIKTVGGKVQCHCGVKDDKDCVPYTKLSAKELRKLMIANGEDNPKIWPAQVDNLLNKEMAFRIKFQSSYKQYSIVTILNEDNVYNKLKGYLTLDEEHTSNAPVLEISNSDPNHEPTEPIMTLSAQASISPQPSSASSGSTPAKRGAISTSVNELIEAEDLTPKQSATKAKTTRKIKHIKME 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi921g00003 497 Gene3D - 110 250 IPR012340 -
Vivi921g00003 497 MobiDBLite consensus disorder prediction 442 497 - -
Vivi921g00003 497 SUPERFAMILY Nucleic acid-binding proteins 117 242 IPR012340 -
Vivi921g00003 497 MobiDBLite consensus disorder prediction 442 463 - -
Vivi921g00003 497 CDD RPA1_DBD_A_like 19 103 - -
Vivi921g00003 497 SUPERFAMILY Nucleic acid-binding proteins 7 107 IPR012340 -
Vivi921g00003 497 Gene3D - 6 108 IPR012340 -
Vivi921g00003 497 CDD RPA1_DBD_B_like 137 241 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi921g00003 18 337 Core DNA Replication Machinery Family AT5G08020 23.121 1.55e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi921g00003 - - vvo:131597380 964.526