Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi919g00024 ATGCTACCCTCTACCTTCATTATGATTCTGTTCATAATTCTCTTTGTCCTTTCCGCACTTTCATGGCCACAAGCTATAGCTGAAGCCACTGAAACTGAATCACAGGCTTTGTTAAAATGGAAACATAGCTTTGATAACCACAGCCAAACTCTCTTATCAACTTGGATAAATACCACAAGTCCATGCAAATGGCAAGGAATTCAATGTCATAAATTCAGTTCAGTTTCTGCCATAAACCTTGCAAATTTGGGCCTAAATGGTACACTTCACACCCTCAGTTTTTCTTCATTACCAAACCTCATAACCCTAGATATCTACAATAACCAATTTTATGGAACCATTCCTCCACAAATTGGTAACATGTCAAAAATAAACAGATTGAATTTTTCTCAAAACCCTATTGGTGGTTCCATTCCTCAAGAAATTTTCACTTTGAGAAGCTTACAAAACCTTGATTTTGCTGGTTGTAAACTAAGTGGAGCAATTTCTAACTCCATAGGAAATTTATCCAATTTATTATATCTAGATTTAGGAGTCAATGATTTTTCTGGTGGATCTATTCCTCCTGAGATTGGAAAATTGAACAAATTATGGTATCTAGCAATTTCAAATTGTGGCCTAATTGGTTCAATTCCACAAGAAATTGGACTTTTGACAAACCTTACTTTTATTGATTTGTCAATGAATTCTCTTTCTGGTGTTATCCCTGAAACCATAGGTAACCTGAGTCAATTAAATAGACTTTACCTTTCTAATAACACCAAGTTGTCTGGTCCAATTCCACAATCCTTGTGGAACATGTCTAGCTTGAATCTGATTTACTTTGATCATATGAATCTTTCTGGTTCAATCTCTGATTCTATACAAAACTTGGTTAATTTGTATTCACTTGCACTTGATAACAATCGCCTTTCTGGATCCATTCCTTCCACAATTGGGAACTTGAAAAATCTTGTTTTTTTGTGGTTGATGAATAATCGTCTTTCTGGATCAATTCCTGCCTCGATAGGTAATTTGATCAATTTGGATGTTCTTAGTCTCCAAGTAAACAATCTCTCTGGAACAATTCCAGATTCAATTGGAAATTTGAAGAAGCTCACTGCTTTTGAAGTAGCTACCAATAAACTTCACGGTAGAATTCCAAATGGACTTTTCAACATTACCAATTGGGAATCCTTTATTGTGTCTCAGAATGATTTTGTTGGCCATTTGCCGTCTCAAATATGCTCTGGTGGAAGGTTAATGCTCTTAAATGCTTATCAGAATCGTTTCACCGGTCCGGTGCCAACAAGTTTGAAAAATTGTTCTAGCATTGAAAGAATCAGGCTCGAGGAGAATCAAATTGAAGGAGATATATCACGAGATTTTGGTGTATATCCGAAATTGCAGTATCTTGATATTAGTAAAAATAAATTTCAGGGACACATTTCAACAAACTGGGAAAAGAGTCTTGATCTCCATACTTTCAAGGTATCTAACAATAATATTTCCGGTGTTATACCATTAGAACTTATTGGTTTAACCAAACTCGGCAGGCTTCACCTTTCTTCAAATCAATTGACGGGGAAACTTCCAAAGGAATTAGGAGAGATGACAACATTAACTGAACTCAAGATTAGTAACAATCATTTCACCGGTAACATTCCAACAGAAATTGGAATGCTGCAAACACTTGATACGTTGGATCTCGGTGGAAACGAGTTGAGTGGCACGATACCGGAAGAAGTAGCAAGGCTACCGAGGTTACGACTGTTGAATTTAAACAGAAATAAAATTGAAGGAAGTATGCCATATAAGTTTGGTTCAGCTCTTGAGTCACTTGATCTCAGTGGCAATTTTTTGAATGGAAAAATACCAACAACTCTTGGAGGTTTGGTGCAGTTGTCAATGTTGAATCTCTCACATAATATGCTTTCAGGAACCATTCCTCAAAATTTTAAAAGGAGTTTGGATTTCGTTAACATATCAGACAACCAGTTAGAAGGTCCACTTCCGAAAATTCCTGCTTTTCTTAATGCTCCATTTGAATCATTCAAACATAACAAAGGCTTATGTGGAAATATCACAGGCTTGACTTCTTGTGCAACACCCCATAGTCAAAAGAGCAAAAATGTCTTTCGATCTGTATTCATTGCTATAGGAGCTCTGATACTAGTGTTGTGTGGCATTGGAATTTCAATCTACATTTTGTGTCTAAGAAAATCACCAAAGAAAGAAAGCCAATCTGAAGAAGCACAAAGGGGAGTACTATTTTCAATTTGGAGTCATGATGGGAAAATGATGTTTGAAAATATCATTGAAGCTACTGAGAATTTTGATGACAAACATCTCATTGGAGTTGGGAGTCAAGGAAATGTTTACAAGGCAGAGTTGGCTACGGATTTGGTTGTTGCTGTTAAGAAGTTTCATTTGGTAACAGACGAAACAAAGTCATATTTCAGTTCAAAGTCTTTTACGAGTGAGATTGAAGCCTTGACAGGAATCAAACACAGAAACATCATAAAGCTTCACGGGTTTTGCTCACATTCTAAGTTCTCATTCTTGGTTTACAAGTTCATGGAAGGCGGAAGCTTAGATCAAATGCTAAACAATGACACACAGGCTGCTGCATTTGATTGGGAAAAGAGGATGAATGTTGTTAAAGGTGTAGCCAATGCTTTGTCCTACCTGCATCATGATTGCTCGCCTCCAATTATTCATCGCGACATATCAAGCAAAAATGTTCTTCTTGATCTTGACTATGAAGCTCATGTCTCCGACTTCGGGACGGCTAAGTTTCTAAAGCCGGGCTTACTTAGTTATACCGAATTTGCAGGAACCTTTGGGTATGCAGCTCCAGAGTTGGCACAAACAATGGAAGTGAATGAGAAATGTGATGTATATAGCTTTGGAGTACTTGCATTGGAAATCATAATGGGAAAACATCCAGGAGATCTCATTTCATTATTTTTGTCACCATCTACAAGATCAACGGCTAATAATATGTTGTTGATAGACGTTTTAGATCAAAGACCTCAACAAGTTAAGAAACCAATTGATGAGGAAGTGATCTTGATTGCAAGGTTGGCATTGGCTTGCTTGAGTCAAGAACCACGTTCTAGACCAACCATGGATCAAGTGTCAAAGATGCTTGCAATAGGAAAAACACCTTTGGGGAACCAACTCCACATGATTAGACTAGGACAACTAGAATAA 3195 0.3712 MLPSTFIMILFIILFVLSALSWPQAIAEATETESQALLKWKHSFDNHSQTLLSTWINTTSPCKWQGIQCHKFSSVSAINLANLGLNGTLHTLSFSSLPNLITLDIYNNQFYGTIPPQIGNMSKINRLNFSQNPIGGSIPQEIFTLRSLQNLDFAGCKLSGAISNSIGNLSNLLYLDLGVNDFSGGSIPPEIGKLNKLWYLAISNCGLIGSIPQEIGLLTNLTFIDLSMNSLSGVIPETIGNLSQLNRLYLSNNTKLSGPIPQSLWNMSSLNLIYFDHMNLSGSISDSIQNLVNLYSLALDNNRLSGSIPSTIGNLKNLVFLWLMNNRLSGSIPASIGNLINLDVLSLQVNNLSGTIPDSIGNLKKLTAFEVATNKLHGRIPNGLFNITNWESFIVSQNDFVGHLPSQICSGGRLMLLNAYQNRFTGPVPTSLKNCSSIERIRLEENQIEGDISRDFGVYPKLQYLDISKNKFQGHISTNWEKSLDLHTFKVSNNNISGVIPLELIGLTKLGRLHLSSNQLTGKLPKELGEMTTLTELKISNNHFTGNIPTEIGMLQTLDTLDLGGNELSGTIPEEVARLPRLRLLNLNRNKIEGSMPYKFGSALESLDLSGNFLNGKIPTTLGGLVQLSMLNLSHNMLSGTIPQNFKRSLDFVNISDNQLEGPLPKIPAFLNAPFESFKHNKGLCGNITGLTSCATPHSQKSKNVFRSVFIAIGALILVLCGIGISIYILCLRKSPKKESQSEEAQRGVLFSIWSHDGKMMFENIIEATENFDDKHLIGVGSQGNVYKAELATDLVVAVKKFHLVTDETKSYFSSKSFTSEIEALTGIKHRNIIKLHGFCSHSKFSFLVYKFMEGGSLDQMLNNDTQAAAFDWEKRMNVVKGVANALSYLHHDCSPPIIHRDISSKNVLLDLDYEAHVSDFGTAKFLKPGLLSYTEFAGTFGYAAPELAQTMEVNEKCDVYSFGVLALEIIMGKHPGDLISLFLSPSTRSTANNMLLIDVLDQRPQQVKKPIDEEVILIARLALACLSQEPRSRPTMDQVSKMLAIGKTPLGNQLHMIRLGQLE 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi919g00024 1064 SMART LRR_typ_2 339 363 IPR003591 -
Vivi919g00024 1064 SMART LRR_typ_2 579 602 IPR003591 -
Vivi919g00024 1064 SMART LRR_typ_2 169 194 IPR003591 -
Vivi919g00024 1064 SMART LRR_typ_2 218 241 IPR003591 -
Vivi919g00024 1064 SMART LRR_typ_2 97 121 IPR003591 -
Vivi919g00024 1064 SMART LRR_typ_2 625 648 IPR003591 -
Vivi919g00024 1064 SMART LRR_typ_2 291 315 IPR003591 -
Vivi919g00024 1064 SMART LRR_typ_2 507 531 IPR003591 -
Vivi919g00024 1064 Gene3D Transferase(Phosphotransferase) domain 1 853 1050 - -
Vivi919g00024 1064 FunFam MDIS1-interacting receptor like kinase 2 853 1050 - -
Vivi919g00024 1064 Pfam Leucine rich repeat 533 592 IPR001611 GO:0005515
Vivi919g00024 1064 Pfam Leucine rich repeat 220 277 IPR001611 GO:0005515
Vivi919g00024 1064 Gene3D Phosphorylase Kinase; domain 1 733 852 - -
Vivi919g00024 1064 Pfam Leucine Rich Repeat 604 625 IPR001611 GO:0005515
Vivi919g00024 1064 Gene3D Ribonuclease Inhibitor 486 691 IPR032675 -
Vivi919g00024 1064 Gene3D Ribonuclease Inhibitor 29 184 IPR032675 -
Vivi919g00024 1064 Pfam Protein kinase domain 773 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi919g00024 1064 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 188 409 - -
Vivi919g00024 1064 Gene3D Ribonuclease Inhibitor 185 277 IPR032675 -
Vivi919g00024 1064 SUPERFAMILY RNI-like 78 386 - -
Vivi919g00024 1064 ProSiteProfiles Protein kinase domain profile. 772 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi919g00024 1064 Pfam Leucine rich repeat N-terminal domain 32 69 IPR013210 -
Vivi919g00024 1064 SUPERFAMILY RNI-like 350 662 - -
Vivi919g00024 1064 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 356 1045 - -
Vivi919g00024 1064 ProSitePatterns Tyrosine protein kinases specific active-site signature. 898 910 IPR008266 GO:0004672|GO:0006468
Vivi919g00024 1064 Gene3D Ribonuclease Inhibitor 379 485 IPR032675 -
Vivi919g00024 1064 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 410 698 - -
Vivi919g00024 1064 Gene3D Ribonuclease Inhibitor 278 378 IPR032675 -
Vivi919g00024 1064 FunFam Nuclear pore complex protein NUP107 30 187 - -
Vivi919g00024 1064 FunFam Leucine-rich repeat receptor protein kinase MSP1 735 852 - -
Vivi919g00024 1064 SUPERFAMILY Protein kinase-like (PK-like) 757 1044 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi919g00024 7 946 Receptor kinase-like Gene Family AT4G08850 43.887 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vivi919g00024 Pkinase 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi919g00024 - - gmx:100815688 1313.52