Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi919g00009 ATGGCTGCTACTTCTTCACCCACCGATTCAAACCCTCCCTCCGCCGTTCCTCTCCCTCTTTCCCTACCTGCCCCACCACCACCTACCACCTCCCGTCGTCTTCCTCCTCCCTGCTGGACACCGGAGGAAACCTCTGCCCTAATCGACGCTTACCGTGACAAATGGTACTCTCTCGGCCGAACAAATCTCAAAGCCATCCACTGGCAGGAAGTCGCCGACGCTGTCACCGCTCGTTGCCCTAACGCTTCGCCGACGAACAAAACCGCCGTTCAGTGCCGTCACAAAATGGAGAAACTGAGGAAACGTTACCGATCTGAGATTCAACGAATCAGATCTCTCCCGATTCCGAAATCTCGTTCGTCTTCTTCTTGGGCTCATTTCAAATCCATGGATTCCATGGAAAAAGGTCCTTCTCCTCCTTCTCCACCTTCTCCACTTTCTCCACCACCAAAACTAGAAAATCATAACCATAACTATAACCATCTCAACCACCGTGAAACCCTAGTTGATAACGATGATCTCGACGATGACGATCTATACGAGGAACTCAGAAGCGGTGCCGGAAACACCAGAAATCTTGATAAATTCTACCGGAATGGATCTGCCGGCGGTGGATTCCGGATCCGGATCCCAACCGGTGTGAGTGTTGCGCAACCTGGATCTAAATTCTACGGTGGACACCAACAGAAAATGAACATGAACATGAACATGAATATTAACCAATCAGAATCAGGTTCTCGCGGTGGTTATATCAACGGCGGAACAAGGCTTGTTAAGGAGAAGATTGGGTTGGGGAAGAGAGAAAGAGAGAGAGAGGTGGAGAGAGAAAGAGATCCTATTGGTGAAATGGTGAATGCTATTAAGTTTTTGAGAGATGGGTTTGTGAGGATGGAGCAGATGAAGATGGAGATGGCTAGAGAGATCGAAACGATGCGGATGGAGATGGAGATGAAGCGAACTGAGATGATTCTTGAGTCTCAGCAGAGGATTGTTGAAGCCTTTGCGAAAGCGGTTTCGGAGAAGAACAAGAAGAGGAAACTACATAAGGGTAATAGTAACAGCAACAACAACATAGCTTCGCCTTCGGAATCGTAG 1095 0.4858 MAATSSPTDSNPPSAVPLPLSLPAPPPPTTSRRLPPPCWTPEETSALIDAYRDKWYSLGRTNLKAIHWQEVADAVTARCPNASPTNKTAVQCRHKMEKLRKRYRSEIQRIRSLPIPKSRSSSSWAHFKSMDSMEKGPSPPSPPSPLSPPPKLENHNHNYNHLNHRETLVDNDDLDDDDLYEELRSGAGNTRNLDKFYRNGSAGGGFRIRIPTGVSVAQPGSKFYGGHQQKMNMNMNMNINQSESGSRGGYINGGTRLVKEKIGLGKREREREVERERDPIGEMVNAIKFLRDGFVRMEQMKMEMAREIETMRMEMEMKRTEMILESQQRIVEAFAKAVSEKNKKRKLHKGNSNSNNNIASPSES 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi919g00009 364 MobiDBLite consensus disorder prediction 136 150 - -
Vivi919g00009 364 MobiDBLite consensus disorder prediction 114 128 - -
Vivi919g00009 364 MobiDBLite consensus disorder prediction 108 158 - -
Vivi919g00009 364 Gene3D - 39 105 - -
Vivi919g00009 364 MobiDBLite consensus disorder prediction 1 38 - -
Vivi919g00009 364 MobiDBLite consensus disorder prediction 340 364 - -
Vivi919g00009 364 MobiDBLite consensus disorder prediction 12 35 - -
Vivi919g00009 364 ProSiteProfiles Myb-like domain profile. 39 100 IPR001005 -
Vivi919g00009 364 FunFam Trihelix transcription factor ASIL2 39 105 - -
Vivi919g00009 364 SMART 118neu2 46 138 IPR006578 -
Vivi919g00009 364 Pfam Myb/SANT-like DNA-binding domain 37 133 IPR044822 -
Vivi919g00009 364 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 14 341 IPR044823 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi919g00009 38 136 Trihelix Transcription Factor Family AT1G54060 34.343 3.41e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vivi919g00009 Myb_DNA-bind_4 1.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi919g00009 - - mtr:11426900 425.631