Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi916g00004 ATGGATAAAAATCTCGCTGAAAATTCCGATACTCTCCCTCACACCGACGCAACACCAATGCCGGATCCCAATCTCACCGACGAAACCAACGGAGAACAACCACCGCCACCTCCGTCGGAGGAAAATCCACCCGGGGAAGAGAAGAAAGAAGAAAATGTAGAAACCACGGAATCCGCAGATGCCTCTGCGGATTCCGTGGAGTCTCCTCCTCCTAGCTTTGAGAAAATATCAGAAGAAGTCGATGAATTTCTTGTGAGTTTGCATGAGAAAGATGAGATTCCTGATTACGTAGGAAAGTTCTTGGATCTGGTGGAGGAGAATTTGGCGAAATGTGAATCCGGTAAAGCAAAATGGGAAGAGATTCTGGAGAAAGATACATGGTTATTGGAATCTGTGAATCGGATTTCGAAGCTTAAGAAGATTCTGACTCGTCATGATGAAAACGAAACCGTAGAAGAGAAGGATGAGAAACGAGACTCAACAAGGAACCGCATTGGTGTAATTCAACAGAAAGCGATGTCGTTTTTGGAAGAAGATTTCCGTGTGTTAATGGAAGATTCTAGAATGCCAATGGAATTGAACACCGATGGACAAACAGTTGATTCAAAAGGAAAACATGTGGCATCAGAGGAAGGTGGTGATTCTGATCATCAACCGGACGAATCCGAGACGAATTTCCCGGGTTATACAGATGAGGTGATTGCTTGTATGAGCAAGATCGCGTGCGAGATGTTAACCGGAGGATACGAATCGGAGTGTTGCCAGGTGTATATCGTGGCGAGAAGGGCCGCGTTTGAGGAGATTCAACAGAAACTAGGGCTGGAAAGAATCAGCATTGATGATATGGTTCAGAAGGTGCAATGGGAGATTCTAGCAAGAGACATGATTCCGGCGTGGACTAACACGATCCGTAAATGCACAACCGTGTATTTCCCCGGCGAGAGGAAACTAGCCGAGGCGGTATTCTCAAGTAATCAATCGGTTGCGGCTGGTCTATTTGGTAGCCTCTCCCGCGGAGTTGTGATTCCGCTTCTCAACTTCGCGGAAGGGGCTGCCATGACTAAGCGTGCAGGAGAGAAGCTATTCAAGTTGCTTGACATGTACGAAACGCTTAGAGATGTTATACCGAAGTTGGACGGACTCTTTCCTGAAGAGTCCTCCGAGGAGTTGAAGACAGAGATAACCCTCGCCAAAACACGTCTTGGCGAGGCAGCTATCGCTATCTTCTGCGACTTAGAAAACTCAATCAAGTCAGAACCCGCGAAAAACCCAGTCCCGGGTGGCGCGGTTCACCCTCTCACGCGCTATATAATGAATTACCTCATCATAGCTGGTGATTACAAAGAAACCTTAGAACAGGTTTTCCGGGATCATTCAAAGATCGAAAGCATAGATTCAAGTAGTAGATTCGATGACAATGAAAACGACGTTGTTCCAGAAGAAGCATCGTCGCCATTTTCAGCACAGCTAATGAGAGTCATGGACTTACTAGATGCAAGCCTAGAAGGGAAAGCGAAACTGTACCGCGACGTAGCATTAAGCAACTTCTTCATGATGAACAATGGTAGATACACTTTACAAAAGATCAAAAGTTCAACTGAAATGAGCCAAGTGATGGGCAACACATGGTGTAGAAAGAAATCCTCTGAGTTAAGAAACTATCACAAGACATATCAGAGAGAAACATGGAACAAAGTTTTAACATGTCTGAGTCAAGAAGGGCTAACTGTGAATGGGAAGGTACAGAAGCCAGTGCTGAAAGAGAGGTTCAAAAGCTTCAATACATTGTTTGATGAGATTCATAGGACACAAAGCTTATGGGTTGTGAGGGATGAGCAGCTTCAATCAGAGCTTCGGGTATCGATATCCGCGGTCGTGATTCCGGCGTACAGGGCATTCTTTGGGAGGTTTTCACAGAATTTAGATTCTGGGAGACAGTCAGAGAAGTATATAAAGTACCAACCTGAGGATATAGAGACTTACATTGATGATTTGTTTGATGGAAAGCCTCCTCAATCTAATGCTAGAAGGAAAACATAA 2040 0.4495 MDKNLAENSDTLPHTDATPMPDPNLTDETNGEQPPPPPSEENPPGEEKKEENVETTESADASADSVESPPPSFEKISEEVDEFLVSLHEKDEIPDYVGKFLDLVEENLAKCESGKAKWEEILEKDTWLLESVNRISKLKKILTRHDENETVEEKDEKRDSTRNRIGVIQQKAMSFLEEDFRVLMEDSRMPMELNTDGQTVDSKGKHVASEEGGDSDHQPDESETNFPGYTDEVIACMSKIACEMLTGGYESECCQVYIVARRAAFEEIQQKLGLERISIDDMVQKVQWEILARDMIPAWTNTIRKCTTVYFPGERKLAEAVFSSNQSVAAGLFGSLSRGVVIPLLNFAEGAAMTKRAGEKLFKLLDMYETLRDVIPKLDGLFPEESSEELKTEITLAKTRLGEAAIAIFCDLENSIKSEPAKNPVPGGAVHPLTRYIMNYLIIAGDYKETLEQVFRDHSKIESIDSSSRFDDNENDVVPEEASSPFSAQLMRVMDLLDASLEGKAKLYRDVALSNFFMMNNGRYTLQKIKSSTEMSQVMGNTWCRKKSSELRNYHKTYQRETWNKVLTCLSQEGLTVNGKVQKPVLKERFKSFNTLFDEIHRTQSLWVVRDEQLQSELRVSISAVVIPAYRAFFGRFSQNLDSGRQSEKYIKYQPEDIETYIDDLFDGKPPQSNARRKT 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi916g00004 679 PANTHER EXOCYST COMPLEX PROTEIN EXO70 104 668 IPR004140 GO:0000145|GO:0006887
Vivi916g00004 679 Pfam Exo70 exocyst complex subunit 299 664 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vivi916g00004 679 SUPERFAMILY Cullin repeat-like 133 667 IPR016159 -
Vivi916g00004 679 MobiDBLite consensus disorder prediction 203 221 - -
Vivi916g00004 679 MobiDBLite consensus disorder prediction 1 77 - -
Vivi916g00004 679 Gene3D Exocyst complex component Exo70 115 676 - -
Vivi916g00004 679 MobiDBLite consensus disorder prediction 191 226 - -
Vivi916g00004 679 MobiDBLite consensus disorder prediction 42 56 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi916g00004 22 679 EXO70 exocyst subunit family AT5G13990 47.273 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi916g00004 K07195 - gmx:100820172 863.988