Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi911g00007 ATGGGCCCTTCTGGCTCTGGAAAATCTACACTTCTTGATGCTTTAGCAGGAAGATTAAGCTCAAACATAAAGCACACTGGAAAAATTCTAATCAATGGCCACAAACAAGCACTGGCTTATGGAATATCAGGCTATGTAACACAAGACGAGGCTATGCTGTCAACGTTAACGGCCGGGGAAACTTTATACTATTCAGCTCAGCTTCAATTTCCAGATTCCATGTCAATAGCAGCAAAAAAGGAGCAAGCAGATCTTATACTCAGAGAAATGGGCCTAATAGATGCTGTTAACACAAGGGTTGGAGGATGGAGTTCTAAAGGTCTAAGTGGAGGACAAAGGAGGAGACTTAGCATTTGCATTGAGATTCTAACGCGACCGAGACTTCTCTTCCTTGATGAACCGACGAGCGGACTCGATAGTGCAGCTTCTTATTATGTTATGAGTAGGATTGCACGTTTAAATTTAAGCGACGGCATTCGAAGGACTGTTGTTGTGTCCATCCACCAACCTAGCAGTGAAGTTTTTGAACTTTTTCATGACCTTTGTCTTCTGTCTTCTGGTGAAACTGTATATTTTGGTCCATCCTATGATGCAAATCAGTTTTTTGCTGCAAATGGTTTTCCTTGTCCAACACTCCACAATCCTTCTGATCATTACTTAAGGATAATAAACAAAGATTTTGAAACGGATGATGTTGAAGAAGGCTTTGGTAAGGGAGTAACCACAGAAGAAGCAATTGATATCCTTGTAAAGTCTTATAAATCATCTCGGATTAGAAAAAAAGTTAAAAAAGAAGTTGCGAAAATAAGTAAAAGTGACTCTGGTGCAATAGGGAAGAAGAGGACTCATGCTGCATTTATCACTCAATGTCTTGTACTTATAAGAAGATCTTCTCTGCAATTGTTTCGAGACGTAGGAAACTACTGGCTTCGTTTAGTTGTCTTTGTTATAATTGCTATAAGCATTGGTTCTATCTTCTATAACATTGGTTCAAGTAGTGGATCAGGATCTATTCAGGGTAGAGGTTCATTGCTCACATTTCTTATTTCAGTTCTCACTTTCATGACCCTTGTTGGTGGATTCTCTCCTCTTTTGGAGGAAATGAAGGTATTTGAACGAGAAAGATTGAACGGACACTATGGTGTAACTGCTTTTCTGATTGGAAATATATTTTCTGCTGTTCCATACATTCTAATGATCTCTCTAATTCCTGGAGGAATAGCATACTACCTATGTGGAATGCACAAAGGACTAGAACACTTTGTATACTTCATTTCATTGCTATTAGCCATTGTGATGTGGGTTGAGAGTCTCATGTTAGTTGTTGGAAGCATATCACCAAACTATGTAATAGGAATGTTCATCACTGGTGGAATTGAAGGACTCATGATACTAACAGCTGGATTCTATAGATTACCAAATGAACTACCTAAACCACTATGGAAGTACCCTTTATACCATATATCATTCCTCAAGTATGCATTTCAAGGATCATTCAAGAATGAGTTTGAAAAGTTGAATGTTTCTATGGAGACCAAAACTATGAGTGGTAGGGAAATATTGGATGAGACATGGCATGTTGAAATGGGTTACTCTAAGTGGGTTGATCTTGTTATCATGTTTGGTATGATTGTGTTGTATAGAGTTTTGTTCTTGGTCATTACTAAGAGTAAGGAGAAGTTGAAGCCTTTTGTTGCAAAGCTGACACGGTCAGCCCGTATTCAGGAAAAGGATCAATCAATGGTCAACATTATACCACATGATATGTTGATTCCTAGCTTTGGCAATCCACTTTCATCTATTCTAGAAAGCAAATATCCAAATATATTACACAACTTGAATGATCCATCTTTTTTTCAAGAGAAAGCAATATTAGCTCCTAAAAATACCATTGTCGACGCCCTTAATGATTATATGTTGGATTTAATACCTGCAGAAGAAAAAACTTATTTGAGTTATGATTCTCCATGTAATGTTAGGTCAGACATTAACATGTCAGATGATGTGCATACTCCTGAATTCTGA 2025 0.3773 MGPSGSGKSTLLDALAGRLSSNIKHTGKILINGHKQALAYGISGYVTQDEAMLSTLTAGETLYYSAQLQFPDSMSIAAKKEQADLILREMGLIDAVNTRVGGWSSKGLSGGQRRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIARLNLSDGIRRTVVVSIHQPSSEVFELFHDLCLLSSGETVYFGPSYDANQFFAANGFPCPTLHNPSDHYLRIINKDFETDDVEEGFGKGVTTEEAIDILVKSYKSSRIRKKVKKEVAKISKSDSGAIGKKRTHAAFITQCLVLIRRSSLQLFRDVGNYWLRLVVFVIIAISIGSIFYNIGSSSGSGSIQGRGSLLTFLISVLTFMTLVGGFSPLLEEMKVFERERLNGHYGVTAFLIGNIFSAVPYILMISLIPGGIAYYLCGMHKGLEHFVYFISLLLAIVMWVESLMLVVGSISPNYVIGMFITGGIEGLMILTAGFYRLPNELPKPLWKYPLYHISFLKYAFQGSFKNEFEKLNVSMETKTMSGREILDETWHVEMGYSKWVDLVIMFGMIVLYRVLFLVITKSKEKLKPFVAKLTRSARIQEKDQSMVNIIPHDMLIPSFGNPLSSILESKYPNILHNLNDPSFFQEKAILAPKNTIVDALNDYMLDLIPAEEKTYLSYDSPCNVRSDINMSDDVHTPEF 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi911g00007 674 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 574 - -
Vivi911g00007 674 Pfam PIF1-like helicase 558 674 IPR010285 GO:0000723|GO:0003678|GO:0006281
Vivi911g00007 674 ProSitePatterns ABC transporters family signature. 108 122 IPR017871 GO:0005524|GO:0016887
Vivi911g00007 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 201 IPR027417 -
Vivi911g00007 674 Pfam ABC transporter 1 136 IPR003439 GO:0005524
Vivi911g00007 674 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 211 IPR003439 GO:0005524
Vivi911g00007 674 Pfam ABC-2 type transporter 168 225 IPR043926 GO:0140359
Vivi911g00007 674 Gene3D - 1 204 IPR027417 -
Vivi911g00007 674 SMART AAA_5 1 187 IPR003593 GO:0016887
Vivi911g00007 674 Pfam ABC-2 type transporter 288 503 IPR013525 GO:0016020|GO:0140359
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi911g00007 1 172 Calmodulin-binding Proteins AT2G36910 30.978 2.13e-08 55.8