Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi911g00001 ATGGCTTTCCTTCATCCATCTGAAAGTTTTGAAATCAAAACCTCTTCAGAACCATCAGTTCTAGACATTGAGGCCACCACAACCATACCAGAAGGTAACCACCATGGTATATGCTTAACATGGAAAGATATATGGGTGAATACAATAGCAAAGGGAAAGAATGGAAGAAGATCAATTCTTCAAGGACTAACTGGATATGCTAAACCAGGTCAACTTTTAGCCATTATGGGTCCTTCTGGCTGTGGCAAGTCTACACTACTTGATACGTTAGCAGGAAGATTAGCCACAAACACAAGACAAACGGGGGAAATTCTAATCAATGGTCACAAACAAGAACTATCATATGGAACTTCGGCTTATGTCACACAAGATGATACATTATTAACAACCTTAACTGTTAAAGAGGCAGTGTACTATTCAGCTCAACTTCAATTACCTAACACAATGTCCAAACAAGAGAAGAAAGAAAGAGCTGATTTTACAATCAAAGAAATGGGTCTTCAAGATGCTACTAACACAAGAATTGGAGGGTGGGGTGTTAAAGGAATAAGTGGGGGTCAAAAAAGAAGAGTTAGCATTTGCATTGAGATTCTAACACGTCCTAGACTTCTTTTTCTTGATGAACCAACTAGTGGACTTGATAGTGCTGCTTCTTACTATGTCATGAAAAGAATTGCTTCTTTGGATCAAAAAGATGGAGTTCAAAGGACTATTATCACTTCTATTCATCAACCTAGTTCTGAAGTTTTTCAACTTTTTGATAACCTTTGTCTTCTCTCTTCTGGTAAAACTGTTTATTTTGGACCTGCTTCAGCTGCATGTGAGTTTTTCGCCTTGAATGGATTTCCTTGTGCTCCTCTCCAAAATCCGTCCGATCATTTACTTAAAACTATAAACAAGGATTTTGATCAGGAAACTGATACAGAAATATCCATTGAAGAAGCAATTAGTATCCTTGTGAGTTCATATAAATCATCTGAAATGAACAAAGATGTACACAACGAAGTAGCAATTCTATCCGAAAAGCAAATGAAACCAATGGACAAGAACAAAGGTCATGCAGGATTCTTTAATCAATGCTTAGCTCTTATCAAACGATCATCATTGAACATGTTTCGTGATCTAGGCTATTACTGGTTACGTTTAGGGATATATATTGCATTGGCCTTAAGTTTAGGAACTGTTTTCTATGATTTTGATACAAGTTATGCCTCAATTAAGGATCGTGGTTCGCTTCTTTCGTATATCTCTGGATTCTTAACTTTCATGAGTATTGGTGGATTCCCTTCATTTGTGGAAGACATGAAAGTATTTCAAAGAGAGAGACAAAACGGGCATTATGGCGTGGTAGCATATGTGATCGGAAACACATTTTCATCGGTTCCATTCATTTTAGTGGTTTCGATAATTCCATCGGTTATAACTTACTACCTATGCAGTCTTCAAAAAGGATCTGAACACTTTTTCTACTTTGCTAGTGTTTTATTTTCAAGTCTAATGTTAGTTGAGAGTCTCATGATGATAGTTTCAAGCATTGTTCCTAACTATCTAATGGGAATCGTAACGGGTGCTGGAATTCAAGGAGTCATGATGTTGGTTGGAGGGTTCTTTAAATTGCCACATGATCTTCCCAACTTTTTTTGGAGATATCCATTCCACTACATGGCATTTCACACATATGTAACTGAGGGATTGTTCAAGAATGAGTATGAAGGACTAAGATTTGATGGTCCAAATGCACAAGGCGTAAATATCCACATGACTGGTGAAGAGGTTTTGACAGAGATATGGCAAATTGGCATGAGTTATTCAAAGTGGGTTGATCTTGCAATTATGTTTGGGATGATTGTTTTGTACCGTGTTTTGTTTCTTTTTATCATCAAGGGTACGGAGAAGATGAAACCTATTGTTGGATCATTGTTGTATAGGATGGGAGAGTCTTCCAAGACAGTGATACATGTTGAGAAGCCCGATGCTACTCCTTTGAATGAGCACGTCGTGTGA 2004 0.3752 MAFLHPSESFEIKTSSEPSVLDIEATTTIPEGNHHGICLTWKDIWVNTIAKGKNGRRSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLATNTRQTGEILINGHKQELSYGTSAYVTQDDTLLTTLTVKEAVYYSAQLQLPNTMSKQEKKERADFTIKEMGLQDATNTRIGGWGVKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMKRIASLDQKDGVQRTIITSIHQPSSEVFQLFDNLCLLSSGKTVYFGPASAACEFFALNGFPCAPLQNPSDHLLKTINKDFDQETDTEISIEEAISILVSSYKSSEMNKDVHNEVAILSEKQMKPMDKNKGHAGFFNQCLALIKRSSLNMFRDLGYYWLRLGIYIALALSLGTVFYDFDTSYASIKDRGSLLSYISGFLTFMSIGGFPSFVEDMKVFQRERQNGHYGVVAYVIGNTFSSVPFILVVSIIPSVITYYLCSLQKGSEHFFYFASVLFSSLMLVESLMMIVSSIVPNYLMGIVTGAGIQGVMMLVGGFFKLPHDLPNFFWRYPFHYMAFHTYVTEGLFKNEYEGLRFDGPNAQGVNIHMTGEEVLTEIWQIGMSYSKWVDLAIMFGMIVLYRVLFLFIIKGTEKMKPIVGSLLYRMGESSKTVIHVEKPDATPLNEHVV 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi911g00001 667 FunFam ABC transporter G family member 11 37 322 - -
Vivi911g00001 667 Pfam ABC-2 type transporter 359 570 IPR013525 GO:0016020|GO:0140359
Vivi911g00001 667 SMART AAA_5 69 263 IPR003593 GO:0016887
Vivi911g00001 667 Pfam ABC transporter 61 211 IPR003439 GO:0005524
Vivi911g00001 667 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 44 286 IPR003439 GO:0005524
Vivi911g00001 667 Gene3D - 42 362 IPR027417 -
Vivi911g00001 667 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 277 IPR027417 -
Vivi911g00001 667 Pfam ABC-2 type transporter 243 345 IPR043926 GO:0140359
Vivi911g00001 667 ProSitePatterns ABC transporters family signature. 183 197 IPR017871 GO:0005524|GO:0016887
Vivi911g00001 667 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 32 643 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi911g00001 59 247 Calmodulin-binding Proteins AT2G36910 30.256 8.25e-11 63.5