LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi907g00004	ATGGCAAAAACAAAACACCTTCCGTCACCCCTCAAAGTACCACCCTCCGCCTCTTCCTCCGAGGAAGATTCTTCCAAAGAAGAAGCTGAGGTACCTCAATCCAAAAACCCTCCACCTCTTGCTTCCAAAAACCCTCCATCAGCTACTTCAAACTCAAACCCTAAACCACCATCATCTTCTGAATCCGAATCTGGCTCAGATTCTGAATCCGAAACCAAAACTGATTCTGATTCGGAACCGGAACCCACTCCACCTGTGAAACCACTTGCATCGAAGCCGCTGAAGATTCTAACCACTCCTTCACCGGCTAAAGCTGGAACCAAGCGTGCTATCGAGTTTCAAACCACTAGAACCAAGCGTGCGACTGATAACAACGGCACTGACTCTGACTCTTCTAAGCATTTGAAGAAGAAAGCAAACAAAACTAAACATCGTGGTTCCGGTGACGAGAAGGAAGCGAGACTATTCAGCGAGGAAGACGAACTCGCCATTCTGAAAGGTCTAGCTGATTTCATTTCAACTAAAAATGATCCTTTGAAAAACACACAAGCATTTTACAATTTTGTGAAGAACTCTATTCGAGCTGACGCAAACAAGGGTCAACTTAGGCGTAAAGTTCTTGATCTGAAGAAAAAGTTTGAAAGAAATGATGAAAATTTCACCAAAGAACATGATCAGAAAACTTTTGAACTTTTCAAGAAGATTGGGTTTAAAAAACAGAGAACACCAAAAAAGGGCTTGGGTTCGGATTCTGTTTCTGCAAAAGAAGTATTAGTTGCAAAGAAGGAAGATGTTGTGAAAAATGTTAAAAACAGTTTGGCTTTTAAGGAAATGTCTAAGTTTGGTGATGAAGAAAAATGGAAGAAGGTTCAGATTGTTGAGATGAAGTTGTTTATGACTCGAGCGGGGCTGGTTAGAGAACAAGCTAGCATGATACTGGAGTCATTAGTTTGA	954	0.4151	MAKTKHLPSPLKVPPSASSSEEDSSKEEAEVPQSKNPPPLASKNPPSATSNSNPKPPSSSESESGSDSESETKTDSDSEPEPTPPVKPLASKPLKILTTPSPAKAGTKRAIEFQTTRTKRATDNNGTDSDSSKHLKKKANKTKHRGSGDEKEARLFSEEDELAILKGLADFISTKNDPLKNTQAFYNFVKNSIRADANKGQLRRKVLDLKKKFERNDENFTKEHDQKTFELFKKIGFKKQRTPKKGLGSDSVSAKEVLVAKKEDVVKNVKNSLAFKEMSKFGDEEKWKKVQIVEMKLFMTRAGLVREQASMILESLV	317

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi907g00004	317	PANTHER	BNAANNG10740D PROTEIN-RELATED	55	314	IPR007592	GO:0006355
	Vivi907g00004	317	MobiDBLite	consensus disorder prediction	66	80	-	-
	Vivi907g00004	317	MobiDBLite	consensus disorder prediction	45	65	-	-
	Vivi907g00004	317	MobiDBLite	consensus disorder prediction	1	155	-	-
	Vivi907g00004	317	Pfam	Protein of unknown function, DUF573	154	235	IPR007592	GO:0006355

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi907g00004	4	235	GeBP Transcription Factor Family	AT1G61730	33.735	2.66e-20	88.6

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GeBP	Vivi907g00004		DUF573	3e-19	CL0123

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi907g00004	-		-	vvo:131637722	534.643