Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi906g00004 ATGAAGAATAATATTTCAAAGAGAAGTGGTGTTAGAAAGTATCATAAATCAGAACAGCCACGCCTTAGATGGACGCCTGAACTTCATCAATACTTTGTTCATACTGTTGAAAGTCTTGGTGGAAAACACAAGGCAAGTCCAAAACACATTTTGAATATGATGCAAGTGAAGGGGCTCAGAATCTCTCACATTAAAAGCCATCTTCAGATGTACAGGAACGTGAAGGGAGAGAGGATACTTGAAGAAAATTCACAATTCAATCATTGCTTCACTTCTTCATCCCAAAGAACGAAGAATATCACTCAAGAATTTCAGCCTTTATACAGTAGAGGACTTTCAGAAACAAGTGAAACTTGTCATTATGATCTAAATCAGGAGCCCGAGTCAAGTGTATGCTTTCATAGTGATATATCAAATGAAGAAGGAAATTGCACGAGTACCAAATATCTAAATCTCCCATTCCCTTTCAGTTCTCTGTCAATTCCTATGGTGCATAGTGATCAAGAAAGAACACAATTTTCTTCACCAAATACAACAGATAAACACTTAGAAGTTTCTAGTTCCATAAAATCTAGCGATTATATAAACTTAGACCTATCAATTTGA 606 0.3581 MKNNISKRSGVRKYHKSEQPRLRWTPELHQYFVHTVESLGGKHKASPKHILNMMQVKGLRISHIKSHLQMYRNVKGERILEENSQFNHCFTSSSQRTKNITQEFQPLYSRGLSETSETCHYDLNQEPESSVCFHSDISNEEGNCTSTKYLNLPFPFSSLSIPMVHSDQERTQFSSPNTTDKHLEVSSSIKSSDYINLDLSI 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi906g00004 201 Gene3D - 19 75 - -
Vivi906g00004 201 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 7 104 IPR046955 GO:0003700
Vivi906g00004 201 NCBIfam myb-like DNA-binding domain, SHAQKYF class 20 73 IPR006447 GO:0003677
Vivi906g00004 201 SUPERFAMILY Homeodomain-like 18 73 IPR009057 -
Vivi906g00004 201 FunFam Two-component response regulator 15 78 - -
Vivi906g00004 201 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 76 IPR017930 -
Vivi906g00004 201 Pfam Myb-like DNA-binding domain 22 72 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi906g00004 9 79 G2-like Transcription Factor Family AT1G14600 64.789 5.21e-26 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vivi906g00004 Myb_DNA-binding 6.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi906g00004 - - psat:127085289 352.443