Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi905g00026 ATGATAGCTATTCGTTTGCTTCTAACACTTTTGGTTCCATTTCTACTTTCTTCTTTTGTTTCCTCTTATTCCACAAATGAAGTTAAACTATGGTGTAACCAAACTCCTAACCCTCAACCTTGTGAGTATTTCTTGAACAATAACCCTTCTTACCAACACAATCTCATCAAACAAAAATCTGATTTCTTCAAACTTTCATTACAACTTGTTCAACAAAGAGCACTCAAAGCCCATGCAAACACTCTTTCATTACGCTCCAAATGCAATAACCCACGTGAAATATCTGCATGGGCTGATTGTGTTGACCTATACCAACAAACCATCCTTAAGCTTAACAAAACCCTAGACACTAAAACTAAATGTTCTCAAGTTGATGCTCAAACATGGCTAAGCACTGCTCTCACAAACCTCGAGACATGTAAAGCTGGATTCTATGATCTTGGTGTTCAAGACTATGTTCTTCCTCTCATGTCCAACAATGTTACTAAATTGCTAAGCAATACCTTGGCTCTTAACAAAGTTCAATATCAAGAACCTAGCTACAAAGATGGTTTCCCGACATGGGTTAGGCCTGGTGATAGAAAGTTGTTGCAAACATCTTCATCTTCTCAGCCTAATGCAGTAGTGGCTAAAGATGGATCAGGAAAGTACACGACAGTTAGTGCAGCTGTAAACGCTGCACCAAAGAATAACAAAGGACGGTATGTTATACATGTGAAGGCTGGTGTTTACAATGAACAAGTTGAAATCAAAGCAAAGAATATCATGTTGGTAGGAGATGGTATTGGAAAAACTATAATCACTGGTAGCAAAAGTGTCGGAGGAGGAACCACGACTTTTCGTTCAGCCACAGTTGCTGTTGTTGGGGATGGATTTATTGGTCAAGATATAACGTTTAGAAACACTGCTGGTGCAAGTAACCATCAAGCTGTCGCGCTTCGTTCTGGATCAGACTTGTCTGTATTTTATAGATGTAGTTTTGAAGGTTATCAAGACACACTATATGTACATTCAGATAGACAATTCTACAAAGAATGTAACATTTACGGTACAGTCGACTTCATATTCGGTAATGCTGCTGCAGTTTTCCAAAACTGCAACATATTTGCAAGAAACCCTCCAAACAAAGTCAACACAATTACTGCACAAGGTAGAATGGATCCAAATCAAAACACTGGTATTTCCATTCATAACTCTAGGGTTACCGCTGCTTCGGATTTGAAACCTGTTCAAGGTTCGGTTAAGACTTATCTTGGAAGACCATGGAAGCAATACTCTAGGACAGTTTTTATGAAGAGTTCTCTTGATAGTTTGATTCATCCAGCTGGTTGGTTGGAATGGAGTGGTGATTTTGCATTAAGGAGTTTATACTATGGTGAGTACATGAACACTGGTCTTGGTTCTTCTACAAGAAACCGAGTGAAATGGCAAGGTTATCATGTGATGACTAGTGCTTCTGAAGCATCGAAATTCACTGTTTCGAATTTCATTGCTGGAAACTCATGGTTACCTGCAACCAAAGTGCCTTTTACATCTACTCTTTAA 1545 0.3883 MIAIRLLLTLLVPFLLSSFVSSYSTNEVKLWCNQTPNPQPCEYFLNNNPSYQHNLIKQKSDFFKLSLQLVQQRALKAHANTLSLRSKCNNPREISAWADCVDLYQQTILKLNKTLDTKTKCSQVDAQTWLSTALTNLETCKAGFYDLGVQDYVLPLMSNNVTKLLSNTLALNKVQYQEPSYKDGFPTWVRPGDRKLLQTSSSSQPNAVVAKDGSGKYTTVSAAVNAAPKNNKGRYVIHVKAGVYNEQVEIKAKNIMLVGDGIGKTIITGSKSVGGGTTTFRSATVAVVGDGFIGQDITFRNTAGASNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSDRQFYKECNIYGTVDFIFGNAAAVFQNCNIFARNPPNKVNTITAQGRMDPNQNTGISIHNSRVTAASDLKPVQGSVKTYLGRPWKQYSRTVFMKSSLDSLIHPAGWLEWSGDFALRSLYYGEYMNTGLGSSTRNRVKWQGYHVMTSASEASKFTVSNFIAGNSWLPATKVPFTSTL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi905g00026 514 SMART complete 239 416 IPR006633 -
Vivi905g00026 514 ProSitePatterns Pectinesterase signature 1. 231 250 IPR018040 -
Vivi905g00026 514 NCBIfam pectinesterase inhibitor domain 6 173 IPR006501 GO:0004857
Vivi905g00026 514 FunFam Pectinesterase 200 514 - -
Vivi905g00026 514 PANTHER PECTINESTERASE 12 506 - -
Vivi905g00026 514 ProSitePatterns Pectinesterase signature 2. 348 357 IPR033131 -
Vivi905g00026 514 Pfam Pectinesterase 206 500 IPR000070 GO:0030599|GO:0042545
Vivi905g00026 514 Gene3D - 200 514 IPR012334 -
Vivi905g00026 514 SMART PMEI_2 23 171 IPR006501 GO:0004857
Vivi905g00026 514 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 174 IPR035513 -
Vivi905g00026 514 CDD PMEI-like_3 30 173 - -
Vivi905g00026 514 SUPERFAMILY Pectin lyase-like 201 513 IPR011050 -
Vivi905g00026 514 Gene3D Invertase/pectin methylesterase inhibitor family protein 22 174 IPR035513 -
Vivi905g00026 514 Pfam Plant invertase/pectin methylesterase inhibitor 27 171 IPR006501 GO:0004857
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi905g00026 1 514 Carbohydrate Esterase AT2G45220 66.538 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi905g00026 K01051 - gmx:100783964 867.455