Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi902g00026 ATGGATGAAAGAGAAGCTATGGCATTCTCTGATGGGTCTGGTTCATATTACATGCATAGAGGAGGAGGGGTTGGTGGGTCTGGTGGTAATGGAGGAGTGTTCCAACAAACACCTTCTGGGTTTAGAGCTTTGTCTAACAATGCTCATGGTGGTTCTGATGGTTCTGCATTTTCAGTGGAGCCTCAGCATGATAGTTTTAGTCATGGTGGTGTTAGCAACAGCTTAGGTTCATCTCCTGGTCCTGTAGTGCCTTATTCAGGAGAGCAGTCTGTGAAAAAGAAAAGAGGGAGACCTAGGAAGTATGGTCCTGATGTACCTGTTTCTTTGAGGCTCTCTTCTCCTATGTCTGCCACTGATAATTCCATGTCTCCTTCGGAGAAACGGCCGAGAGGACGCCCACCTGGAAGTGGAAGGAAACAACAACTAGCTGTTCTAGGTGAATGGATGAACAGCTCTGCTGGCCAGGCCTTTTCACCCCATGTTATCACCATTGGAGTTGAGGAGGACATTGTAGCAAAGTTACAGGCATTTTCACAACTCAGACAACGCGCTTTATGCATCTTGTCAGGAACTGGGTCTGTATCTTCAGTCACTCTGCGCCAGCCTGCTTCTGCGACTATCAGTGTTGCATTCGAGGGGCGATTCCAAATATTATGCTTATCTGGCTCTTACTTGGTTGCTGAAGATGGTGGACCTCAAAATCGAACTGGTGGCATTAGTGTTTCCCTTTCTAGTCCGGACGGTCATGTTATTGGCGGTGGCGTTGCTAGGCTTATTGCTGCAAGCCCTGTCCAGGTGGTAGTTTGCAGTTTCGTATATGGCGGCTCTAAGGCGAAGACTGCCACAAAAGAAGGTGATGGTTCAGAGCCTCAGAGTAGCGACCAGTTAGCTTCTCCAGGAAGTGAACCATCTAATCAAAACTACACAGCTTCTGGAACAGGAACAGGCACAATGTGGCTTGGATCAAGGCCAGTAGATGAGAAAAGTGAACATCCACACACTGGTATTGACTTGATGCATGGGTGA 1026 0.4776 MDEREAMAFSDGSGSYYMHRGGGVGGSGGNGGVFQQTPSGFRALSNNAHGGSDGSAFSVEPQHDSFSHGGVSNSLGSSPGPVVPYSGEQSVKKKRGRPRKYGPDVPVSLRLSSPMSATDNSMSPSEKRPRGRPPGSGRKQQLAVLGEWMNSSAGQAFSPHVITIGVEEDIVAKLQAFSQLRQRALCILSGTGSVSSVTLRQPASATISVAFEGRFQILCLSGSYLVAEDGGPQNRTGGISVSLSSPDGHVIGGGVARLIAASPVQVVVCSFVYGGSKAKTATKEGDGSEPQSSDQLASPGSEPSNQNYTASGTGTGTMWLGSRPVDEKSEHPHTGIDLMHG 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi902g00026 341 MobiDBLite consensus disorder prediction 324 341 - -
Vivi902g00026 341 ProSiteProfiles PPC domain profile profile. 154 292 IPR005175 -
Vivi902g00026 341 Gene3D - 159 285 - -
Vivi902g00026 341 MobiDBLite consensus disorder prediction 285 318 - -
Vivi902g00026 341 MobiDBLite consensus disorder prediction 30 84 - -
Vivi902g00026 341 MobiDBLite consensus disorder prediction 1 139 - -
Vivi902g00026 341 PRINTS AT-hook-like domain signature 92 102 IPR017956 GO:0003677
Vivi902g00026 341 PRINTS AT-hook-like domain signature 125 136 IPR017956 GO:0003677
Vivi902g00026 341 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 68 304 IPR039605 GO:0003680
Vivi902g00026 341 CDD DUF296 159 271 IPR005175 -
Vivi902g00026 341 Pfam Plants and Prokaryotes Conserved (PCC) domain 159 272 IPR005175 -
Vivi902g00026 341 MobiDBLite consensus disorder prediction 279 341 - -
Vivi902g00026 341 SUPERFAMILY AF0104/ALDC/Ptd012-like 155 273 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi902g00026 1 341 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 47.837 4.06e-86 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi902g00026 - - vvo:131637666 646.351