Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi902g00011 ATGTCTTCTGATATCTATACTTTCGATATTTCTCATCACACACATTCAACTCCAAACATATTCTCCTATGATCCTTACTACCCTTTCGATTTCATTGATGCAGTTCAAGAGGATTTCAACAATTCTTTAGACCCTTTTTCCCTTTCTTCCCCAACCACCAACCATGCGCTACCACTAACAAATGGTTTAAATACAAACACTGAGCTTGAAGATTATCATAATAACACAGTCATGGATTCCGCAAATTTTCAGTGGCATGAATTGAACTCATCTGAAAATAGTTTCTTCACCGGACAAATAAGAAGGGCAAGCAGTGAAGGCGATTCCCAAACGGAGGAAGCAAAGTTGTTGAAAGTAGGGCGTTACAGTGTAGAAGAAAGAAAACAAAAAATCTCTAAATACAGAGCAAAGAGAAAACAGAGGAAGTTCAACAAAATTATTAAGTATGAATGTCGAAAGACACTGGCCGACAATAGAACACGCATACGTGGCAGATTCGCACGTAACGATGAAACCAGTGAGATTCCAAAAACTCCATGTTCAAAAACAGCAGAAAGGCATTGTTCTGAAGATGAGTTATGGGTTGATCTGATTGAAGGATTAAATGAAGATCATACATCATGTTTTTATTTAAGCTGA 639 0.374 MSSDIYTFDISHHTHSTPNIFSYDPYYPFDFIDAVQEDFNNSLDPFSLSSPTTNHALPLTNGLNTNTELEDYHNNTVMDSANFQWHELNSSENSFFTGQIRRASSEGDSQTEEAKLLKVGRYSVEERKQKISKYRAKRKQRKFNKIIKYECRKTLADNRTRIRGRFARNDETSEIPKTPCSKTAERHCSEDELWVDLIEGLNEDHTSCFYLS 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi902g00011 212 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 70 178 IPR045281 GO:0009909
Vivi902g00011 212 Pfam CCT motif 127 169 IPR010402 GO:0005515
Vivi902g00011 212 ProSiteProfiles CCT domain profile. 127 169 IPR010402 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi902g00011 103 174 C2C2-CO-like Transcription Factor Family AT5G24930 43.056 7.36e-11 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi902g00011 CCT 4.8e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi902g00011 - - vvo:131637649 441.039