Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi902g00010 ATGGGGTTTCCAACAGACGTTATGTTGCCAACGGTTTTTATGCAGTTTCTTTCAGTATTAGCTTCCATCAGAAAACTCCTTACTCTCTTTTTCTGTTATTTCGGTTTCGAATCCGACTTTTCCTTTCCTGAAACTACGCCTGAACCCCGGCTGCTCATCAGAGAAATCCTTCCGGCGGTGAAATTCTCAGAGCTGGAGCTGGCAGTGGTAGAATGCTCACAGGATGGCTGTGCCGTCTGCCTTTACGAGTTCAAGGCGGAAGATGAGATCCAACGGCTCACAAACTGCCGTCACATCTTCCATAAAAACTGCCTCGACCGTTGGATGGGATACTATCATACGACATGTCCTTTGTGCCGCACAACTTTCCTACCGCGTCACATGCAAGATACATGA 396 0.4747 MGFPTDVMLPTVFMQFLSVLASIRKLLTLFFCYFGFESDFSFPETTPEPRLLIREILPAVKFSELELAVVECSQDGCAVCLYEFKAEDEIQRLTNCRHIFHKNCLDRWMGYYHTTCPLCRTTFLPRHMQDT 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi902g00010 131 ProSiteProfiles Zinc finger RING-type profile. 77 120 IPR001841 -
Vivi902g00010 131 Pfam Ring finger domain 77 120 IPR001841 -
Vivi902g00010 131 PANTHER RING ZINC FINGER PROTEIN-RELATED 19 126 - -
Vivi902g00010 131 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 125 IPR013083 -
Vivi902g00010 131 SMART ring_2 77 119 IPR001841 -
Vivi902g00010 131 SUPERFAMILY RING/U-box 70 126 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi902g00010 1 129 C3H Transcription Factor Family AT1G63840 47.619 2.97e-38 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi902g00010 K16281 - gmx:102665617 175.252