Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi901g00020 ATGGCAACTGATATGCAAAGGCTGGTTGGAATGAGTGAGGATGATGGAGAAATGGGAATGGGTGTGAAAGACGAGGATGACGAGGACGAAGATTACGAGGAAAATGGAGGTGAGCATGGAAATGCTTTACAAGTGGCAGAGTTTGATGGTGGGAGTGGGATGGGAACTGGAGCTGGTGACAACAGGTTTCAGCAGCAATACGAGTTTCAAGAGCAAGTAGGCACTCCAGGTGGAGGTAATCGAAGATCTAGACCGGTAGAAGAGAAAGAGAGGACTAAGCTAAGAGAAAGGCGCCGGAGGGCTATCACTGCTCGGATCTTGGCAGGGCTTCGAAGGCATGGTAACTATAATCTTAGGGTTAGGGCTGACATAAATGATGTTATTGCTGCTCTAGCTAGGGAAGCTGGATGGGTGGTTCTTCCAGATGGCACTACTTTTCCCTCAAAATCTCAGGGTCAGGTACCAGCTGGCGGCAGTTCTGCAGGTGTTACTTCATCATCATCCCACGTGCCTTCCCAACACCCTCCGTCTGTTTCCCTCAGAGGCGCTGCTACTGGCAATAGGACTCCTTTAGAGTACAATGCATGTCCAATGAAAGATGTTTACGTTCCAGCTCCATCTCCATCCCCTTATGATCTATCCTCAAGTTCCCGGTCTCAAACATCTATGTTAAGGGACGGAAAAATGCAAAGAGACAATCCACCTGTGATTGGTGGTTCAATAGATACCATTAATGAGCAGCAGATTTTGGACATTCCAGCTAGATTACCAGAACGTGATTTTGCCGGGTCCCCATATGTTCCTGTTTATGTGATGCTACCATTGGGAGTGATCAATATTAAATGTGAACTTGTTGATCCGGATGGTCTACTAAAGCAGCTGAGGATGTTGAAATCAGCAAATGTTGATGGTGTTATGGTAGACTGCTGGTGGGGAATAGTGGAAGCACATACTCCACAGGAGTATAATTGGAATGGTTACAAGAGACTCTTTCAAATGGTGCGTGAGCTTAAGCTTAAGTTGCAGGTTGTCATGTCTTTTCATGAATGTGGAGGCAATGTTGGTGATGATGTTTGTATTCCATTGCCCCATTGGGTTGCTGAAATTGGTAGGAGCAATCCAGATATTTTTTTCACGGATAGAGAGGGAAGACGCAATCCTGAATGTCTTTCTTGGGGAATAGATAAGGAACGTGTTTTGAGAGGTCGGAATGCTGTTGAGGTTTATTTTGATTTCATGAGAAGTTTCCGGATAGAGTTTGACGAGTATTTTGAGGATGGTTTTATCTCGCTTGTTGAAGTTGGACTAGGTCCATGTGGAGAGCTAAGATACCCATCATGTCCAGTAAAGCATGGTTGGAGATATCCTGGTATTGGTGAATTCCAGTGCTATGATCAGTATATGTTGAAAAGTCTTAGGAAAGCAGCAGAAGCAAGAGGCCACACTATTTGGGCTAGAGGGCCAGATAACGTGGGTACCTATAATTCTCAGCCACACGAAACAGGTTTCTTTTGCGATGGGGGTGATTATGATGGCTTCTATGGCAGGTTTTTTCTCAACTGGTATTCTCAGGCTTTAGTTGATCATGGAAACCGGGTACTCTCTTTGGCAAAATTAGCTTTTGAGGGGTCCTGCATTTCTGCAAAGCTATCAGGTATTTATTGGTGGTACAAGACTGCTAGTCATGCCGCTGAATTAACTGCTGGGTATTATAATCCATGCAATCGAGATGGCTATGCGGCAATTGTTGCAATGTTAAAGAGAAATGGAGTTAGCTTAAACATTGCTTGTGTTGACCTGCACACGGTGAATCAACATGAGAGCTTTCCAGAGCCATATGCTGACCCTGAGCGATTAGTATGGCAACTGTTGAATGCCGGGTGGGATGTTGGACTACCCGTCGTCAGTGAGAATGCACTTCCTTGCCTAAACAGAGTTGGCTATAACAATGTTTTGGATAATACCAAGCCCGTGAATGATCCAGATGGAAGGCACTTTTCATCCTTTACATACCTGAGGCTCAGTTCACTTCTTCTTGAGCGGCAAAACTTCATAGAGTTTGAACGATTTGTCAAGAGAATGCATGGAGAAGCTGTTCTGGATCTTCAGGTTTAA 2115 0.4478 MATDMQRLVGMSEDDGEMGMGVKDEDDEDEDYEENGGEHGNALQVAEFDGGSGMGTGAGDNRFQQQYEFQEQVGTPGGGNRRSRPVEEKERTKLRERRRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSKSQGQVPAGGSSAGVTSSSSHVPSQHPPSVSLRGAATGNRTPLEYNACPMKDVYVPAPSPSPYDLSSSSRSQTSMLRDGKMQRDNPPVIGGSIDTINEQQILDIPARLPERDFAGSPYVPVYVMLPLGVINIKCELVDPDGLLKQLRMLKSANVDGVMVDCWWGIVEAHTPQEYNWNGYKRLFQMVRELKLKLQVVMSFHECGGNVGDDVCIPLPHWVAEIGRSNPDIFFTDREGRRNPECLSWGIDKERVLRGRNAVEVYFDFMRSFRIEFDEYFEDGFISLVEVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDQYMLKSLRKAAEARGHTIWARGPDNVGTYNSQPHETGFFCDGGDYDGFYGRFFLNWYSQALVDHGNRVLSLAKLAFEGSCISAKLSGIYWWYKTASHAAELTAGYYNPCNRDGYAAIVAMLKRNGVSLNIACVDLHTVNQHESFPEPYADPERLVWQLLNAGWDVGLPVVSENALPCLNRVGYNNVLDNTKPVNDPDGRHFSSFTYLRLSSLLLERQNFIEFERFVKRMHGEAVLDLQV 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi901g00020 704 MobiDBLite consensus disorder prediction 209 227 - -
Vivi901g00020 704 PRINTS Plant beta-amylase signature 427 436 IPR001371 GO:0000272|GO:0016161
Vivi901g00020 704 PRINTS Plant beta-amylase signature 670 684 IPR001371 GO:0000272|GO:0016161
Vivi901g00020 704 PRINTS Plant beta-amylase signature 685 699 IPR001371 GO:0000272|GO:0016161
Vivi901g00020 704 MobiDBLite consensus disorder prediction 1 96 - -
Vivi901g00020 704 MobiDBLite consensus disorder prediction 146 185 - -
Vivi901g00020 704 MobiDBLite consensus disorder prediction 58 77 - -
Vivi901g00020 704 SUPERFAMILY (Trans)glycosidases 261 700 IPR017853 -
Vivi901g00020 704 MobiDBLite consensus disorder prediction 82 96 - -
Vivi901g00020 704 MobiDBLite consensus disorder prediction 19 35 - -
Vivi901g00020 704 Pfam BES1/BZR1 plant transcription factor, N-terminal 79 212 IPR008540 -
Vivi901g00020 704 MobiDBLite consensus disorder prediction 146 184 - -
Vivi901g00020 704 MobiDBLite consensus disorder prediction 207 233 - -
Vivi901g00020 704 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 241 697 IPR001554 GO:0000272|GO:0016161
Vivi901g00020 704 Pfam Glycosyl hydrolase family 14 270 689 IPR001554 GO:0000272|GO:0016161
Vivi901g00020 704 ProSitePatterns Beta-amylase active site 1. 348 356 IPR018238 GO:0000272|GO:0016161
Vivi901g00020 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 544 560 IPR001554 GO:0000272|GO:0016161
Vivi901g00020 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 579 602 IPR001554 GO:0000272|GO:0016161
Vivi901g00020 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 322 340 IPR001554 GO:0000272|GO:0016161
Vivi901g00020 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 510 529 IPR001554 GO:0000272|GO:0016161
Vivi901g00020 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 561 572 IPR001554 GO:0000272|GO:0016161
Vivi901g00020 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 619 641 IPR001554 GO:0000272|GO:0016161
Vivi901g00020 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 437 459 IPR001554 GO:0000272|GO:0016161
Vivi901g00020 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 301 315 IPR001554 GO:0000272|GO:0016161
Vivi901g00020 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 344 365 IPR001554 GO:0000272|GO:0016161
Vivi901g00020 704 Gene3D Glycosidases 258 703 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi901g00020 1 701 Glycoside Hydrolase AT2G45880 64.113 0.0 925
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Vivi901g00020 Glyco_hydro_14 4e-104 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi901g00020 K01177 - gmx:100805560 1137.48