Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi894g00003 ATGTCAACAAGCACCCAAGTGGTGGTTCTCGACAACGGCGGAGGTCTAATCAAAGCAGGATTCGGCGGCGAACGCAACCCCTCCGCCATTCTCCCCAACTGTCTCCACAAACCCCTCGCCTCCAAAAAATGGCTCCACCCAAATCCCCTCAACACCCCCGCCTCCGCCGACCAAGACCTCACCTCCGCCTCCGTCCGCCGTCCCATGGATCGCGGCTACCTAATAAACCCCGACCTCCAGCGCGAAATCTGGTCCCACCTCTTCACCTCCATCCTTCGCATAAACCCTTCCCAATCCTCCCTCCTCCTCACCGAACCCCTCTTCTCTCTCCCTTCCATCCAACACTCCCTTGACGAACTCGTCTTTGAAGATTTCAACTTCACCTCCCTCTACGTCGCTGACTCCCCTTCCCTCGTTCATCTCTACGAAACCAGCCGCAGCCCTAACGGCCTTCTCTCTAAAGCACAATGCAGTCTCGTCGTCGATTGCGGTTTCTCCTTCACGCACGCTTCACCTGTCTTTCAAAACTTCACTCTCAACTACGCGGTTAAGCGAATCGATTTAGGTGGAAAAGCCCTAACGAACTACCTCAAGGAACTTATTTCCTTTCGCTCTGTTAATGTCATGGATGAAACCTTCATCATTGACGATGTTAAGGAGAATCTCTGCTTTGTTTCTGTTGATGTCCCAAGACACCTTGACATTGCTAGAAAGAGTGGAAGAGAGAATCTCTTGAGGTGTACTTATGTGCTACCTGATGGTGTCTCGCACACAAAAGGGTTTCTTAAATATCCTGAACAAGCTAAGAGGTATCTTGTTCCTGATTGTAAGAAGGAGAATATCGATGATCACGAGGAAATTCCTCAACAACAGCATGAGAACAATAGACAGAAAGTTGATTTGACCAAAAATGAATTTGACTTGACCAATGAACGGTTTCTTGTCCCAGAGATGATTTTCCGTCCAGCTGATTTGGGAATGAACCAGGCTGGGCTTCCAGATTGTATCGTACGAGCAGTAAATGCCTGCCATCCGCACCTCCACCCCGTACTCTATGAAAGCATCATTTTAACTGGTGGGAGCACCTTGTTTCCTCACTTTGCTGAGAGACTAGAGAAGGAGCTTCGGCCTTTGTTTCCTGATGACTATAATGTGAAGATAACTACACAAGAAGAGTGTTTGGCGTGGAGGGTCTCTCCTGGCATCAAGTCCCGATTTTGA 1221 0.4906 MSTSTQVVVLDNGGGLIKAGFGGERNPSAILPNCLHKPLASKKWLHPNPLNTPASADQDLTSASVRRPMDRGYLINPDLQREIWSHLFTSILRINPSQSSLLLTEPLFSLPSIQHSLDELVFEDFNFTSLYVADSPSLVHLYETSRSPNGLLSKAQCSLVVDCGFSFTHASPVFQNFTLNYAVKRIDLGGKALTNYLKELISFRSVNVMDETFIIDDVKENLCFVSVDVPRHLDIARKSGRENLLRCTYVLPDGVSHTKGFLKYPEQAKRYLVPDCKKENIDDHEEIPQQQHENNRQKVDLTKNEFDLTNERFLVPEMIFRPADLGMNQAGLPDCIVRAVNACHPHLHPVLYESIILTGGSTLFPHFAERLEKELRPLFPDDYNVKITTQEECLAWRVSPGIKSRF 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi894g00003 406 CDD NBD_sugar-kinase_HSP70_actin 8 200 - -
Vivi894g00003 406 SUPERFAMILY Actin-like ATPase domain 156 392 IPR043129 -
Vivi894g00003 406 Gene3D Actin; Chain A, domain 4 188 329 - -
Vivi894g00003 406 PANTHER ACTIN 7 387 IPR004000 -
Vivi894g00003 406 FunFam Actin-related protein 6 133 193 - -
Vivi894g00003 406 Pfam Actin 4 392 IPR004000 -
Vivi894g00003 406 Gene3D - 136 393 - -
Vivi894g00003 406 SMART actin_3 5 403 IPR004000 -
Vivi894g00003 406 Gene3D - 8 135 - -
Vivi894g00003 406 SUPERFAMILY Actin-like ATPase domain 3 139 IPR043129 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi894g00003 6 392 Cytoskeleton Gene Families AT3G18780 27.110 1.43e-48 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi894g00003 K11662 - gmx:100819827 616.69