LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi892g00007	ATGGATAGCTTAAACATTTTAATAGATTCAGGAGATAGTCAAAGGGAAGATGTAGAAGTTGATCACGATGATGGTGATGGCGATGATTCACGTTGGGTTCCCGAAATTGGAATGTGTTTTTATTGTGTAGAGGAAGTTAAAACATATTATCAGCAGTATGCTTTGAAAAAGGGTTTCGGATGGAGGATTAGGTCATCGAAAAAGGGAGATGATGGAGAGCTCAACTACATAATACTTTCATGTTCAAGAGGGGGATCAACTGTTTCAAAAATTTCATGCACGTTAAAGACACTACCATCTCGAGCGAAAAATTGTCCTGCCAAAATTTATGTTAAAATGAAAGAAGATGGTTTGTGGTACATTACACAATTTGAATCTATCCATTCTCATGAAACTAGCCCTACGAAAGCTAGATTGTTCAAGGCCAACAAGAAAATGAACTTACACGTGAGAAGAAAAATCCAAATCAATGTTGACGCGGGAGTAAGGATCAACAAGACTTTTCAATCGCTAGTTAAAGATGCAGGTCGTCATGAAAATATTCCGTTTTGTGAAAAGGACGTGAGGAATTATATTAACAAAGAACGTCGTGCAATTGGAAAAGAAGGTGATGGTAAGGCTTTGATAAGTTATTTTTGTAAAATGAGGGAACAAAATACAAATTTCTTCTATGACATAGATTTGGATGATGATTTTCATGTGAGGAATGTATTTTGGGCGGATGCAAGAAGTAGAGCCGCTTATGAATATTTTGGTGATGTTGTAACTTTCGATACAACATACTTGACTAACAAGTATGACATGCCTTTTGCTGCATTTGTAGGTGTGAATCACCATGGTCAATCAACATTACTTGGTTGTGGATTACTATCAGGTGAAGACACAGATTCTTTTGTGTGGCTTTTCAAGTCATGGCTTCGTTGTATGTTAGAAAAACCACCTATGGGTATTGTGACCGATCAATGTAAGGCTATGAAAAATGCTATTGAGTTAGTCTTCCCTACAACTCGTCATAGGTGGTGTTTATGGCATATAATGAAAAAAATTCCAGAAAAACTTAGCGGATATGGTGAATACAAAAGGATCAAGTATGCAATGAAAGAAGCAGTCTATGATACATTCACAACAGATGGTTTTGAACAAAAATGGAGTTTGTTCATAGAAAAATTTAATCTCCAAGAGAATGATTGGTTGGGAGGGTTGTATATGGAGCGTCATCGGTGGGCACCAACTTTGTTAAGGAAATATTTTTGGGCTGGTATGTCTACTACGCAGCGTAGTGAGAGCATACATGCCTTCTTTGATGGATATATAAATTCTACAACAAGTCTAAATCAATTTGTGAAACAATATGATAATGCTCTTAGAAGTCGGGCAGAAAAGGAATTTGAAGCTGATTTTAATTCGATGGATACAACAATTCCATGTGGGTCAAACTCGACCATTGAGAAGCAATTCCAAAATAAGTATACTCATGCCAAATTCAAGGAAATTCAAGTGGAATTCAGATCTAAAATGAATTGTTCTACCTCATTGAAAGGCGTGGAAGGTTGCTTTGCTACGTATCATGTGTTAGAGGAGATATTAGTTGGAGAGATACGTAAAGAGCGAGTCTTAAAAGTTGTACTTAACAAGGAAAACCATGATTTCAAATGTGAATGCTCATTGTTTGAGTTTAGAGAATTGAAGCCAAAAATGGACAAGTTTGACAAATTATGCAAACACTTTTATGAGGTTGCTGAAGTAGCTGCTGATTCAGATGAGACTACTGATGACCTCCATGAAACATTACATTTGTTTAGCTCCAATATGTCCATAAAGGATAGTGTAGTTGTTGAAGAGAATATCAATGAGGATTCCAATCCAATCAATAGTAATCACATTCGTAGCCCAAAACATGTCAAGCGCAAAGGTCGTCCTCCATCTAAAAGAAAAATATTTGTCTCTGATACGATTGTTAAGAGGTCAAGGAAGCAAACCAAAAAAAGTGATCACATTGAGCTTACTACAGAGTGCAATATTGGAATGGTGGGAAGTCAGCTCGGAAGTAACATTTGTGTAGAATCATCTCTTGAGGTTGTTAATGGAGGACATTGCTTAAATTCAAATATCGTGGTTGGAGGTAATATGTCATTCATGGATCTTTTGACAACATGTGAAACACCTTTGGTGGGTTCATCTCAAGTTTGTACAAATTGA	2199	0.3656	MDSLNILIDSGDSQREDVEVDHDDGDGDDSRWVPEIGMCFYCVEEVKTYYQQYALKKGFGWRIRSSKKGDDGELNYIILSCSRGGSTVSKISCTLKTLPSRAKNCPAKIYVKMKEDGLWYITQFESIHSHETSPTKARLFKANKKMNLHVRRKIQINVDAGVRINKTFQSLVKDAGRHENIPFCEKDVRNYINKERRAIGKEGDGKALISYFCKMREQNTNFFYDIDLDDDFHVRNVFWADARSRAAYEYFGDVVTFDTTYLTNKYDMPFAAFVGVNHHGQSTLLGCGLLSGEDTDSFVWLFKSWLRCMLEKPPMGIVTDQCKAMKNAIELVFPTTRHRWCLWHIMKKIPEKLSGYGEYKRIKYAMKEAVYDTFTTDGFEQKWSLFIEKFNLQENDWLGGLYMERHRWAPTLLRKYFWAGMSTTQRSESIHAFFDGYINSTTSLNQFVKQYDNALRSRAEKEFEADFNSMDTTIPCGSNSTIEKQFQNKYTHAKFKEIQVEFRSKMNCSTSLKGVEGCFATYHVLEEILVGEIRKERVLKVVLNKENHDFKCECSLFEFRELKPKMDKFDKLCKHFYEVAEVAADSDETTDDLHETLHLFSSNMSIKDSVVVEENINEDSNPINSNHIRSPKHVKRKGRPPSKRKIFVSDTIVKRSRKQTKKSDHIELTTECNIGMVGSQLGSNICVESSLEVVNGGHCLNSNIVVGGNMSFMDLLTTCETPLVGSSQVCTN	732

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi892g00007	732	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	22	595	IPR031052	GO:0006355
	Vivi892g00007	732	Pfam	FAR1 DNA-binding domain	48	132	IPR004330	-
	Vivi892g00007	732	MobiDBLite	consensus disorder prediction	618	642	-	-
	Vivi892g00007	732	Pfam	MULE transposase domain	254	348	IPR018289	-
	Vivi892g00007	732	ProSiteProfiles	Zinc finger SWIM-type profile.	539	584	IPR007527	GO:0008270

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Vivi892g00007		MULE	2.3e-33	CL0219

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi892g00007	-		-	vvo:131641577	1424.45