Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi890g00020 ATGGCGAGTTTCTTGACTGACTTGGCGAAGCCGTATGTGGAGAGATCGATAAATGCAGCGATTGCAGAATCAAGTTATATTTGTTGCTTCACGTGCATTGTGAAGGATTACGAAGAAGAAAAAGATAGATTGGAAATAGAAAGGACAACTTTCGAGCGGCGCATGGAAGAGGCGACAAGAAGAGGGGAAGATGTTCTACCTGATGCTCTTGCTTGGAAAGATGAAGTTGATCAGCTCATTCAAGAAGATACCAAGAAAAATCAAAAATGTTTTTTTGAATTTTGTCCTGATTGCTTATGGAAATATAGTAGAGGAAAATTACTGGCAAATAAGAAGGAGCGAATTAAAGAATTGATGGCAACAGGAAAGGAACTAACAATTGGACTCCCTGCTCATCTTCCTGATATTGAACGATGTACGATCCAACACTATGTGCATCTTAAAAGCAGAGAATCTCAATACACAAAGCTTTTGGTTGAACTCAAAGATGACAATAATTATATGATTGGGTTGCATGGAATGGGGGGCACAGGAAAAACTACATTGATCAAGAAAGTGGGTAAGGAACTTAAGCAATCAAAACAATTTACTCAGGTTATTGATACGACAGTGTCATTTTCTCCCAATATTAAAAAGATTCAAGATGATATTGCCGGGCCTTTGGGATTGAAATTTGATGACTGTAATGATGTAGATCGACCCGGAAAACTATGGCACAGATTGACCAATGGTGAGAGGATTCTTCTAATATTGGATGATGTGTGGGGATATGTCGATTTTAATGAAATTGGAATTCCATATAGTGACAATTGCAAAGGTTGTAGGATTATTGTAACCACGCGCGATCGGTCGGTGTGCAACAAATTAGGGCGCAATAAGACAATCCAACTAGATCTCTTATCTAAAGAAGATGCGTGGATCATGTTCAAAAAGTATGCTGATCTAAGTGAAACCTCAACGAAATTTTTTCTTGACAAGGGCTGTAAAATTGCAAATGAATGCAAAAACCTACCTATTGCAATTGTTGTTATCGCTAGTAGTTTGAAGGGCAAACAACATCACCAACATCAGGAGGAATGGGACATGGCCTTAAAATTCTTGAAAAAAGACATCTCAAGGCACAAGGACGATGATGACGTTCTTGAAATTTATAAATGCTTGAAGTTTAGCTATGATAAGTTGGATGAAGAGGCCAAGAGTCTATTCCTTTTGTGTTCTGTATTTCGAGAAGATGAAGATATTCATACCGAAAGTTTAGCTAGGCTTGCCATCGGAGGAGGTCTTTTTGGGGAAGATTGTCGCAACTACGAAGAAGCCCGAAGACGAGTAGTTATATCCAAAAACAAACTCCTAGATTCTTGTTTATTGTTGGAGGCTGGTCAAAGGAGCGTCAAAATGCATGACTTTGCTCGTGATGCAGCCCAATGGATAGCGAACAAAGAGATTCAAACAAGAAAAGTGTATGATAAAAATCAAAAGGCAATGCTTGAAAGGGAGAAAAATATTAAATATTTGTTATGTGAAGGCAAGCCAGAGGAGGTGTTTTCTTGTAAGTTTGATGGTTCCAAGGTTGAAATTCTAATTGTCATCATTGATACTTGCGGCTTCCGTGATAGAGTAATTGTCCCAGATTCATTTTTTGAAAATAATGTCAGCTTTCGAGTTTTTCATTTACGGATTGATACTTTTTTGATAATTTTATCATTACCTCAATCGATGCAACAATTGAAGAATATCCGATCTCTTATATTTACAAATTGTATTTTGGGTGACATCTCTTTCTTTGGAAATCTGCAAAGTCTTGAGGAACTTGATTTGGATTATTGTCGAATTAATGAAATGCCTAACGGAATTACAGAACTAGAGAAATTTAGATTGTTGAAAATGAAGAGGTGTACAATTGATAGGAATAATCCATTTGAAGTGATTAAAAGATGCTCATCACTTCAAGAGCTGTACTTTGTAAATTGGCAGAAGACTTTTCATGGAGAAATAACTTTTCCTAAATTGCAGAGGTTTCATGTAAGTGAGAATGAAATTAATTCTTCACTATTAAAATTTGTGTCTATTGAATGGAGGAAAGAGATTTTCCTATCTGAAACAACATTTAAGTATTGTATGCAAGAAGCAGAGGTTCTTAGACTAACAAGAATTGAGGGGGAATGGAGAAATATCATACCTGATATTGTTCATATGGATCACGGTATGAATGATCTAGTTGAGCTTGGATTATGTTCCATGTCACAACTAAAGTTCCTCATTAACACTAAGCATCCTCATTCTCAAGTATCAAATGTTTTCTCCAAGTTGGTTGTGTTACGTCTAACAGAAATGGAAAATTTGAAAGAGTTGTGCAATGGTGCTCTTTCCGTTGACTCTTTTAAGAGTTTAGAGAGTCTATCTATTGAGGATTGCAAACAGTTGCAAAGCTTATCAGGGATTGCAAACCAATGCAATCTAAAGAGCGTGTCATTGACGAGATGTCCCATGTTGATCTCCCTATTTGAAGTGTTAACTTCTCATAATCTAGTGTTGTTGGAGAAATTGGAAGTAATTGATTGTGAGAATCTTGAATACTTAATAAAAGATGAAAGAAAATGGGAAATATGTGATAGCAACAGTAGCAATCCAATGTTTATGAAATTGAAAGTTCTTGAAATTCTGGGCTGTCCAAAATTTGAAAAAATAATTCCGCTTATCTCCGCTCATGATCTTCCGGCACTAAAATCTATCAAGGTGGAAAGGTGTGAAAAGTTGAATTACATATTTGGTCAATATGTCGAACTTGGGTCCCTAGAAGATATGGAGCTTGGCTGTGTACCCAATTTGATTGACATTTTTCCAGAATGTAATCGTACAATGTCTTTCTCCACTAACAGGTCATCTCCTATTTCTATATCTGCTTCTGAGCCAACTACACACTCAAACACTATCAAATGCAGCATCTTGTCATGGACTGATAGGTATTGTTGTGGTAAAAAATTGAGGAGTACCACAAGTTCTAAAATTCCATTGATTGATGAGCATCAACCGCACACCAAATTAATGAAATCAAACTCAAATTGTCTTAGCATAAACATTTGGGAGCTATATAAGATCCTATGCAATGTTAAAAAGATTGTGTTGACTGATTTGATGAAGATAAAATCAGTATTTGTCCTATCTTTTGCTCCAATGTTGTTGGAAGTTTTGATAATTAAGAGATGTCATGAATTGAAGCACATAATAATAGACACGGGAGATCATGATAGTACTGGTGGAAATAACTATGGCAATGTCTTCCCAAAATTAAAAGAGCTTGTCGTTGATGATTGCATGCAATTAGAGTGCATATTTGGACACTACAATAATGATCATCCAAACCACACTGAAAGAATATTTTGTGTCAATGAAGTAAATGAACAACAAGTGAACTCAGGATTGAAGAATATTTTGTGTCCGTTTGCAGGTCCCAAAAATTCTTTTGCCCTCCTGAATCTAACAAAGATAACAATTATTGGATGTGAAAAACTACAAATAATTTTCTCTGACTCTATATTAAGATGCCTACCACAATTGGATGAGTTAATGATAGGTGACTGTGAGGAGTTGAAACATATCTTCCAAGATGATTTGGAGAATCAAAACATGTCGTCTTCAACAACATGCTTCCCAAAGCTAAAAGCACTTTCTGTACAAAAATGCAATAAATTGAAATATGTGTTTCCAGTCTCTATTTGTAACCAACTTCCTGAGTTAAAGATTTTATTCATAACAGAAGCAAAAGAGTTAGAGGAAATATTTAAAAGTAGTGAAGGTGAGGGAATTGAGATTGTCAGGATTCCAAATTTGAAAGTTGTAGCAACCTTGGGTCTACCAAGCCTCATCCGGACACAGGAAATTCAATTTCAGAGAGCAGAATATCATTTTATAAAGAATTGTGATAAACTCTCTTTGACTTCAAAATCAACAGAGCTCAACTTCCAGCTCTTTTGGAGTATTTGTGCTGATATTCCAGATTTTGAATGGAGTTATTATTTGTACAATCAAGTTCAAGAGTTAGTTACTGAGATTAAAGTTGAAGCAGCATCAAAAGATGAGATGACTTCTCCACAGATGAAAGTAAAACAAACACAAGAGACAGACCAAGAACTTGTTTTTGAAAATGTTGTTGGTCAAGTGACACCATTAGTAGCAATACTACCAACAAATTCAGAAGCACCGAGGAATGAACAATCAGTTGATCAACAAAGTCCACTTGAAGAAACTGATGCTACTGTCACACCTTCACAGTCGGAGGGTTCAATGTCTGAAAAAGCTGTAGGAACAAAGAATGTGTCACCTATACAATTAGTTGCTCCTAAACAAAAGGGTATTGAGATAAGTGTTGAAGAAGAAACTACATCAGCTAATACAAAGATAATAACATCATCAACTCGTTTAGAATCAGGTTCATCGTCAGAAAAAATAGCAGCAGCAACTTTATCCCCCATCTCTGAAACAAAGAATGAGTCACCTAAACAAAAGGATATCAAAATAAGTGTTGAAGGAGGAGCTGCATCAACTAATGTTAAGACATTAGCAGCATCAACTTCTAAGCGTGAAAAGCTTTCTCATGATATAGAGATAAGTGGTGAACAAGGAACTACATCAACCAATTCCATGGCAACAACATTGTCAATTCCAATAGTTACTTCTGAGCATAATAGTTCATCCCAGGAATATGGTAATGGCCAAACAACCCTTCAATCTTTTTCAATTTCCACAAAAGAGCCACTTGCTATGGATGTTGTTGATCATGGAGGCCCACTGCAAACAAAACAGATTAAAAATCTAGGGGACACTTCTCAAATAGTAGAAGATTCAGGTTCTTCTTTATTTGTCAGGAGGGAGCTTGAGCAACTAGTCTCTGAGAAGCATTTGAATTATGAAACCTTGTCTCTATTGACAGATTTCTTTGTGAAGCATCCTTCTATTCTTTTAAAGGATGCTTTACTGACTAATAGATTCAAGGGTTATGCCTACACTTGCCTTGCAGATTTGTTGACATTCCTCCAAACACATAGTGTGTTGGATGTCTTAGGTTCAAGTCATTCTGAATTTGTTAACTTATTACAAGTTATGCGCAATTTTCCTTTTAACAAGGATTGGTTGGATGGTGTTGAAAAACACGCTTTGTTTCCTGATATGCAATTCTCTCGAGATGCGATGCAAAAACTATTGGATTCTAAGAAACAAGTTACCAAGGAAGTCGAAGAGATGCGTTTGAAGTTGTATTTTGTCAATCAACATGCAGAAGATATCAAGCATCAATTGAGATCCTCTGAAGCTGTTTTGGCGAGTATCATTCAACAAGAGGAACAAGTTTTAGAAACTACGGCTGCTTTAAGTGTTCCTCTTGGCTATTAG 5388 0.3621 MASFLTDLAKPYVERSINAAIAESSYICCFTCIVKDYEEEKDRLEIERTTFERRMEEATRRGEDVLPDALAWKDEVDQLIQEDTKKNQKCFFEFCPDCLWKYSRGKLLANKKERIKELMATGKELTIGLPAHLPDIERCTIQHYVHLKSRESQYTKLLVELKDDNNYMIGLHGMGGTGKTTLIKKVGKELKQSKQFTQVIDTTVSFSPNIKKIQDDIAGPLGLKFDDCNDVDRPGKLWHRLTNGERILLILDDVWGYVDFNEIGIPYSDNCKGCRIIVTTRDRSVCNKLGRNKTIQLDLLSKEDAWIMFKKYADLSETSTKFFLDKGCKIANECKNLPIAIVVIASSLKGKQHHQHQEEWDMALKFLKKDISRHKDDDDVLEIYKCLKFSYDKLDEEAKSLFLLCSVFREDEDIHTESLARLAIGGGLFGEDCRNYEEARRRVVISKNKLLDSCLLLEAGQRSVKMHDFARDAAQWIANKEIQTRKVYDKNQKAMLEREKNIKYLLCEGKPEEVFSCKFDGSKVEILIVIIDTCGFRDRVIVPDSFFENNVSFRVFHLRIDTFLIILSLPQSMQQLKNIRSLIFTNCILGDISFFGNLQSLEELDLDYCRINEMPNGITELEKFRLLKMKRCTIDRNNPFEVIKRCSSLQELYFVNWQKTFHGEITFPKLQRFHVSENEINSSLLKFVSIEWRKEIFLSETTFKYCMQEAEVLRLTRIEGEWRNIIPDIVHMDHGMNDLVELGLCSMSQLKFLINTKHPHSQVSNVFSKLVVLRLTEMENLKELCNGALSVDSFKSLESLSIEDCKQLQSLSGIANQCNLKSVSLTRCPMLISLFEVLTSHNLVLLEKLEVIDCENLEYLIKDERKWEICDSNSSNPMFMKLKVLEILGCPKFEKIIPLISAHDLPALKSIKVERCEKLNYIFGQYVELGSLEDMELGCVPNLIDIFPECNRTMSFSTNRSSPISISASEPTTHSNTIKCSILSWTDRYCCGKKLRSTTSSKIPLIDEHQPHTKLMKSNSNCLSINIWELYKILCNVKKIVLTDLMKIKSVFVLSFAPMLLEVLIIKRCHELKHIIIDTGDHDSTGGNNYGNVFPKLKELVVDDCMQLECIFGHYNNDHPNHTERIFCVNEVNEQQVNSGLKNILCPFAGPKNSFALLNLTKITIIGCEKLQIIFSDSILRCLPQLDELMIGDCEELKHIFQDDLENQNMSSSTTCFPKLKALSVQKCNKLKYVFPVSICNQLPELKILFITEAKELEEIFKSSEGEGIEIVRIPNLKVVATLGLPSLIRTQEIQFQRAEYHFIKNCDKLSLTSKSTELNFQLFWSICADIPDFEWSYYLYNQVQELVTEIKVEAASKDEMTSPQMKVKQTQETDQELVFENVVGQVTPLVAILPTNSEAPRNEQSVDQQSPLEETDATVTPSQSEGSMSEKAVGTKNVSPIQLVAPKQKGIEISVEEETTSANTKIITSSTRLESGSSSEKIAAATLSPISETKNESPKQKDIKISVEGGAASTNVKTLAASTSKREKLSHDIEISGEQGTTSTNSMATTLSIPIVTSEHNSSSQEYGNGQTTLQSFSISTKEPLAMDVVDHGGPLQTKQIKNLGDTSQIVEDSGSSLFVRRELEQLVSEKHLNYETLSLLTDFFVKHPSILLKDALLTNRFKGYAYTCLADLLTFLQTHSVLDVLGSSHSEFVNLLQVMRNFPFNKDWLDGVEKHALFPDMQFSRDAMQKLLDSKKQVTKEVEEMRLKLYFVNQHAEDIKHQLRSSEAVLASIIQQEEQVLETTAALSVPLGY 1795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi890g00020 1795 Coils Coil 1730 1750 - -
Vivi890g00020 1795 MobiDBLite consensus disorder prediction 1395 1435 - -
Vivi890g00020 1795 Gene3D - 133 296 IPR027417 -
Vivi890g00020 1795 SUPERFAMILY RNI-like 879 1253 - -
Vivi890g00020 1795 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 405 IPR027417 -
Vivi890g00020 1795 Gene3D Ribonuclease Inhibitor 1130 1267 IPR032675 -
Vivi890g00020 1795 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1140 1311 - -
Vivi890g00020 1795 PRINTS Disease resistance protein signature 596 612 - -
Vivi890g00020 1795 PRINTS Disease resistance protein signature 168 183 - -
Vivi890g00020 1795 PRINTS Disease resistance protein signature 334 348 - -
Vivi890g00020 1795 PRINTS Disease resistance protein signature 241 255 - -
Vivi890g00020 1795 FunFam Probable disease resistance protein At1g61300 131 294 - -
Vivi890g00020 1795 SUPERFAMILY L domain-like 465 944 - -
Vivi890g00020 1795 Coils Coil 34 61 - -
Vivi890g00020 1795 Pfam NB-ARC domain 156 392 IPR002182 GO:0043531
Vivi890g00020 1795 Gene3D - 299 395 IPR042197 -
Vivi890g00020 1795 Gene3D Ribonuclease Inhibitor 707 962 IPR032675 -
Vivi890g00020 1795 Gene3D Ribonuclease Inhibitor 470 690 IPR032675 -
Vivi890g00020 1795 MobiDBLite consensus disorder prediction 1398 1435 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi890g00020 169 629 WRKY Transcription Factor Family AT5G45050 22.245 3.03e-12 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi890g00020 - - vvo:131637508 1986.85