Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi890g00007 ATGGGGAGTTTCTTGCTTGACTTGGCGAAACCATATGTGGAGCAATTGGTAAATAAGGTGATTGCAGAATCAAGGTATATTTGTTGCTTCACATGCATTGCTAAGGATTTCGAAGAAGAAAAAGTTAGATTAGAAGTAGAAAGGGCAACTTTTGAGCGACACATTGAAGAGGCAACAAGAGGAGGGGAAGTTATTCTACCTGATGCTCGTGCTTGGAAAGAAGAAGTTGATCAGCTCATTCAAGAAGATACCAAAAAAAGACAAAAATGTTTTTTTGAATCCTGTCCTCATTGCTTATGGAGATATACTAGAGGAAAATTTCTTGTAAATAAGAAGGAGCGAATTAAAATATTGATGGCAACAAGAAAGGAACTTACAATTGGACTCCCTGCTCATCTTCCTGATATTGAACGATACACGACCCAACACTATGTGCATCTTAAAAGCAGAGAAACTCAATACACAGAGCTTTTGGCTGAACTCAAAGATGACAACAATTATATAATTGGGTTGCATGGAATGGGGGGTACAGGTAAAACTACATTGATCAAGAAAGTGGGTAAGGAACTTAAGGAATTAAAACAATTTACTCTGGTCATTGTTACGACAGTGTCATCATCTCCCAATATTAAAAAGATTCAAGATGATATTGCCAAGCCTTTGGGATTGAAATTTGATAACTGCAATGATACAGATCGACCTGAAAAACTATGGAACAGATTAACCAATGGTGAGAAGATTCTTCTAATATTGGATGATGTGTGGGACAAACTCAATTTTGAAGAAATTGGAATTCCGTCTAGTGACAATCACAAAGGTTGTAGGGTTATTATAACCACACGCAGTCAGTTGGTGTGCCACAAATTAGGGTGCAATAAGATAATCCAACTAAATCTCATATCTAAAGAAGATGCATGGATCATGTTCAAAAAGTATGCCGATCTATGTGAAACCACCTCAACGCAATTTTTTCTTGACAGGGGCCGTAAAATTGCAAATGAATGCAAAAACCTACCTATTGCAATTGTTGTTATCGCTAGTAGTTTGAAGGGCAAAAAACTTCAGCAACATCGAGAGGAATGGGACATGGCCTTAAAATTCTTAAAAAAAGACATCTCAAGGCACAAGGATGATGATGACGTTCTTGAAATTTATAAATGCTTGAAGTTTAGCTATGATAAGTTGGATGAAGAGGCCAAGAATCTATTCCTTTTGTGTTCTGTATTTCGAGAAGATGAAGAAATTCTAATTGAAAGTTTAGCTAGACATGCCATCGGAGGAGGCCTTTTTGGGGAAGTTTATGGCAGCTACGAAGAAACCCGAAGACAATTAGTTATATCCAAAAACAAACTCCTAGATTCTTGTTTATTGTTGGAGGCCGGTCAAAGGAGAGTGAAAATGCACGACTTCGTTCGTGATGCAGCCCAATGGATAGCGAACAAAGAGATTCAAACAAGAAAAGTGTATGACAAAAATCAAAAGGAAATGATTGAAGAGGAGAAAAATCTTAAATATTTGTTATGCGTAAGCGATGTAAAGGAGATCTTTTCTTGTAAGTTTGATGGTTCCAAGATTAAGATTCTAATTGTCATCATGCATATGCCTTTTCATGGAGAAATTGAAGTCCCAAATTCATTTTTTGAAAATAATACCAGCCTTCGAGTTTTTAATTTACGTAGTGGTCTTGGTTGCGCAGCTATTATATCATTACCTCAATCAATGCAACAATTGAAGAATATCCGATCTCTTATGTTTGCACAGTGTCTTTTGGGTGACATCTCTATCTTTGGAAAGCTGCAAAGTCTTGAAGAACTTGATTTGTATCTATGTGAAATTAATGAATTGCCTAATGAAATTGCAGAACTAAAGAAATTTAGATTTTTGAAATTGGAATGGTGTACATTTGGTGGGAATAATCCATTTGAAGTGATTAAAAGATGCTCATCACTTCAAGAGTTGGTCGTAAAATATAATTACGATATTCATGGAGAAATAACTTTCCCTAAATTGCAGTGGTTTCATGTAAGTGATGAAGATACAACTTATTCTTCACTGTCAAAGTATGTGTCTATGATATATTCGGATAATAAGGTTTTCCTATCTGAAACAACACTCAAACATTGTATGCAAGAAGCAGAGGTTCTTAGACTAACAAGTATTAAGGGGGAATGGAGAAATATCATACCTGATATTGTTCATATGGATCACGGTATGAATAATCTTGTTGAGCTTGACTTACATTCCACTTCACAACTAAAGTTCCTTATTTACACTAAGGATCCTCATTCTCAAATATCAAATGTTTTCTCCAAGTTGGTTCGACTAGTTCTGAATGATATGGACAGTTTGGAAGAATTGTGCAAGGGTTCTTTTTCTGCTGACTCTTTTAAGAGTTTAGAGAGTCTATCTATATTTAATTGCAAACAGTTGCGAAGCTTATCAAGGATTGCAAACCAATGCAATTTAAAGAGTGTGTCATTGATGAATTGTCCCATGTTGAGCTCCTTATTTGAAGTGTCAACTTCTCATAATCTAGTGTTGTTGGAGATATTGATAGTAATTGATTGTCAGAATCTTGAATACTTAATAAAAGATGAAAGAAAAGGGGAAACATTTGAAAGCAACAGTAGCAATCCAATGTTTATGAAATTGAAAGATCTCATAATTGCGGGCTGTCCAAAATTTGAAATAATATTTCCGCTTATCTCTGCTCATGATCTTCCTGCACTAAAATCTGTAGGGGTGGAAAGATGTGATAAGTTGAAATACATATTTGGTCAATATGTCAAACTTGGGTCCCTAGAAGATATGAAGCTTGGCTGTGTACCCAATTTTATTGACATTTTTCCAGAATGTAATCGTACAATGTCTTTCTCCATTAACAGGTCATCTCCTATTTCAATATCTGCTTCCAAGCCAACTACACACTCAAACACTATCAAATGGAGCATCTTGTCATGGACTGATATGTATTGTTGTGGTAAAAAATTGAGGAGTACCACAAGTTCTAAACTTCCATTGATTGATGAGAATCAACCGCACACTAAAGAATCAAACTCAAATTGTCTTAGCATAAACATATGGGAGCGTGCTCAATGTCTTTCAAGACAATCAAAGATCATGTGCAATATTAAAAAGATTGAGTTGAGTAATTTGAAGAAGATAAAATCAGTATTTGTCCTATCTATTACTCCAAAAATGTTATTGGAAACTTTGATACTTGAAAAATGTCATGAATTGAAGCACATCATAATAGACACGGGAGATCACGATAGTACAGGTGGAAATACCCTTGGCAATGTGTTCCCAAAATTAAAAGAGCTTACCATTAAGGATTGCATGCAATTAGAGTACATATTTGGACACTACACTAATGATCATCAAAACCACACTGAATATCATCTTCATCTTTCGTCATTGGAACGTGTCTATCTTTGGGAGCTGCAAAGCTTAGTTGCCATTTGCCCCAAACAATATCATATAACATTGCCAGTTTTGAATCAACTTGTACTCAAATATTGCTCGTGGGATGCTAATATAAAGTCTTTTGGTACAATCATGAAGGATTTGCTTGCTTTGGAAGACCTTGTGTTAACTAACTCCAAAATAGAAAGTATATTTTGTGTCAATGAAGTAAATGAACAACAAGTGAACATAGGATTGCAAAATATTGAGTTGGAAAATTTGAATGTGATGGTGTGTCCTTTTGTGGGTCCCAAAAATTCTTTTTTCCTCCCGAATCTAACAAAGATGAGAATTATTGGATGTGAAAAATTGCAAATAATTTTCCCTGCTTCTATATTAAGATACCTACCACAATTGGATGAGTTAATGATAGGTGACTGTGAGGAGTTGCAACATATCTTCCAAGATGATTTGGAGAATCAAAACATGTCGTCTTCAACAACATGCTTCCCAAAGCTAAAAGCACTTTCTGTAAAAAAATGCAATAAATTGAAATATGTGTTTCCAGTCTCTATTTGTAACCAACTTCCTGAGTTAAGGGTTCTAATCATAACAAAAGCAAAAGAGTTAAAGGAAATATTTAAAAGTAGTCAAGGTGATGGAATTGAGATTGTCAGGATTCCAAATTTGTATTTTGTAGCAACTGTGGGTCTACCAAGCCTCTTCCAGACACAGGAAATTCAATTTCAGAGAGCTGAATATCGTTTAATAAAGAATTGTGATAAACTCTCTTTGACTTCAACAACAAGAATACCCCACTTCTGGAGTTTTTCTCATGATATTCCAGATTTTGAAAGGAATTCTTATTTGTACAATCGAATTCAAGAGTTAGTTACTGAGATTGAAGTTGAAGCAGCATCAAAAAATAAGTGGACTTCTCCACAGTTGAAAGTAAAACAAACACAAAAGACAGACAAAGAACTTGTTGAAAATGTTGCTGGTCAAGTGACACCATTAGTAGCAAAACTACCAACAAATTCAGAAGCACCGAGGAATGAACAATCAGTTGATCAACAAAGTCCACTTGAAGAAACTGATGCTACTGTCACACCTTCACACGTAAATAAATTGGAGGGTTCAATGTCTGAAAAAGCTGTAGGAACAAAGAATGTGTCACCTAAACAAAAGGAGTTGTTAAATGAACAATCAACAACCCAAGGAGAATCTCATGCTACAATTAAACCTTCTCAGGAAAACAATGGTTCAAGGTCAGAAAAAATAGCAGCAGCCAATTTGTCCACCAATTCAGGAACAAAGAATGAGTCACCTATACAAAAGGGTGTCAAGATAAGTGTTGAACAAGGAGCTACATCAACCAATTCCATAGAAATAACATCATCAGGTCCAACAGTTACTTCTGAGCATAATAGTTTATCACAGGCACCAATTAATGAACGAACAATGGATCAACAAACTTCACTTGAAGAAACTGATGCTACTGTCACACCTTCACAGGAGTTGATAAATGAACAATCAACGACCCAACAACAATCACGTGGAGAATCTCAAGCAACAATTAAACCTTCTAAGGGAAACAATGGTTCATCGTCAGAAAAAATAGCAGCAGCAACTTTATCCCCCATCTCTGAAACAAAGAATGAGTCACCTAAACAAAAGAAGGATATCAAAATAAGTGTTGAAGGAGGAGCTGCATCAACTAATGTTAAGACATTAGCAGCATCAACTTCTAAGCGTGAAAAACTTTCTCATGAATATGGTAATGGCCAAACAGCCATTCAATCTTTTTCAATTTCCACAAAAGAGCCACTTGCTATGGATGTTGTTGATCATGGAGGCCCACTGCAAACAAATCAGATTAAAAATCTAGGGGACACTTCTCAAATAGTAGAAGATTCAGGTTCTTCTTTATTTGTCAGGAGGGAGCTTGAGCAACTAGTCTCTGAGAATCATTTGAATTATGAAACCTTGTCTCTATTGACAGATTTCTTTGTGAAGCATCCTTCTATTCTTTTAAAGGATGCTTTACTGACTAATAGATTCAAGGGTTATGCCTACACTTGCCTTGCAGATTTGTTGAAATTCCTCCTAACACATAGTGTGTTGGATGTCTTAGGTTCAAGTCATTCTGAATTTGTTAACTTATTACAAGTTATGCGCAATTTTCCTTTTAACAACGATTGGTTGGATGGTGTTGAAAAACGCGCTTTATTTCCTGATTTACAATTCTCTCAAGATGCGATGCAAAAACTATTGGATTCTAAGAAACAAGTTACCAAGGAAGTCGAAGAGATGCGTTTGAAGTTGTATTTTGTCAATCAACATGCAGAAGATATCAAGCATCAATTGAGATCCTCCGAAGCTGTATTGGCGAGTATCATTAAACAAGAGGAACAGGTTTTAGAAACTACAGCAGCTTTAAGTGTTCCTCTTGGCTATTAG 5865 0.357 MGSFLLDLAKPYVEQLVNKVIAESRYICCFTCIAKDFEEEKVRLEVERATFERHIEEATRGGEVILPDARAWKEEVDQLIQEDTKKRQKCFFESCPHCLWRYTRGKFLVNKKERIKILMATRKELTIGLPAHLPDIERYTTQHYVHLKSRETQYTELLAELKDDNNYIIGLHGMGGTGKTTLIKKVGKELKELKQFTLVIVTTVSSSPNIKKIQDDIAKPLGLKFDNCNDTDRPEKLWNRLTNGEKILLILDDVWDKLNFEEIGIPSSDNHKGCRVIITTRSQLVCHKLGCNKIIQLNLISKEDAWIMFKKYADLCETTSTQFFLDRGRKIANECKNLPIAIVVIASSLKGKKLQQHREEWDMALKFLKKDISRHKDDDDVLEIYKCLKFSYDKLDEEAKNLFLLCSVFREDEEILIESLARHAIGGGLFGEVYGSYEETRRQLVISKNKLLDSCLLLEAGQRRVKMHDFVRDAAQWIANKEIQTRKVYDKNQKEMIEEEKNLKYLLCVSDVKEIFSCKFDGSKIKILIVIMHMPFHGEIEVPNSFFENNTSLRVFNLRSGLGCAAIISLPQSMQQLKNIRSLMFAQCLLGDISIFGKLQSLEELDLYLCEINELPNEIAELKKFRFLKLEWCTFGGNNPFEVIKRCSSLQELVVKYNYDIHGEITFPKLQWFHVSDEDTTYSSLSKYVSMIYSDNKVFLSETTLKHCMQEAEVLRLTSIKGEWRNIIPDIVHMDHGMNNLVELDLHSTSQLKFLIYTKDPHSQISNVFSKLVRLVLNDMDSLEELCKGSFSADSFKSLESLSIFNCKQLRSLSRIANQCNLKSVSLMNCPMLSSLFEVSTSHNLVLLEILIVIDCQNLEYLIKDERKGETFESNSSNPMFMKLKDLIIAGCPKFEIIFPLISAHDLPALKSVGVERCDKLKYIFGQYVKLGSLEDMKLGCVPNFIDIFPECNRTMSFSINRSSPISISASKPTTHSNTIKWSILSWTDMYCCGKKLRSTTSSKLPLIDENQPHTKESNSNCLSINIWERAQCLSRQSKIMCNIKKIELSNLKKIKSVFVLSITPKMLLETLILEKCHELKHIIIDTGDHDSTGGNTLGNVFPKLKELTIKDCMQLEYIFGHYTNDHQNHTEYHLHLSSLERVYLWELQSLVAICPKQYHITLPVLNQLVLKYCSWDANIKSFGTIMKDLLALEDLVLTNSKIESIFCVNEVNEQQVNIGLQNIELENLNVMVCPFVGPKNSFFLPNLTKMRIIGCEKLQIIFPASILRYLPQLDELMIGDCEELQHIFQDDLENQNMSSSTTCFPKLKALSVKKCNKLKYVFPVSICNQLPELRVLIITKAKELKEIFKSSQGDGIEIVRIPNLYFVATVGLPSLFQTQEIQFQRAEYRLIKNCDKLSLTSTTRIPHFWSFSHDIPDFERNSYLYNRIQELVTEIEVEAASKNKWTSPQLKVKQTQKTDKELVENVAGQVTPLVAKLPTNSEAPRNEQSVDQQSPLEETDATVTPSHVNKLEGSMSEKAVGTKNVSPKQKELLNEQSTTQGESHATIKPSQENNGSRSEKIAAANLSTNSGTKNESPIQKGVKISVEQGATSTNSIEITSSGPTVTSEHNSLSQAPINERTMDQQTSLEETDATVTPSQELINEQSTTQQQSRGESQATIKPSKGNNGSSSEKIAAATLSPISETKNESPKQKKDIKISVEGGAASTNVKTLAASTSKREKLSHEYGNGQTAIQSFSISTKEPLAMDVVDHGGPLQTNQIKNLGDTSQIVEDSGSSLFVRRELEQLVSENHLNYETLSLLTDFFVKHPSILLKDALLTNRFKGYAYTCLADLLKFLLTHSVLDVLGSSHSEFVNLLQVMRNFPFNNDWLDGVEKRALFPDLQFSQDAMQKLLDSKKQVTKEVEEMRLKLYFVNQHAEDIKHQLRSSEAVLASIIKQEEQVLETTAALSVPLGY 1954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi890g00007 1954 Gene3D Ribonuclease Inhibitor 701 870 IPR032675 -
Vivi890g00007 1954 Gene3D Ribonuclease Inhibitor 1162 1354 IPR032675 -
Vivi890g00007 1954 FunFam Probable disease resistance protein At1g61300 132 293 - -
Vivi890g00007 1954 Gene3D - 300 396 IPR042197 -
Vivi890g00007 1954 PRINTS Disease resistance protein signature 241 255 - -
Vivi890g00007 1954 PRINTS Disease resistance protein signature 335 349 - -
Vivi890g00007 1954 PRINTS Disease resistance protein signature 168 183 - -
Vivi890g00007 1954 PRINTS Disease resistance protein signature 736 752 - -
Vivi890g00007 1954 MobiDBLite consensus disorder prediction 1474 1559 - -
Vivi890g00007 1954 SUPERFAMILY RNI-like 1080 1347 - -
Vivi890g00007 1954 Gene3D Ribonuclease Inhibitor 462 700 IPR032675 -
Vivi890g00007 1954 MobiDBLite consensus disorder prediction 1520 1559 - -
Vivi890g00007 1954 MobiDBLite consensus disorder prediction 1591 1673 - -
Vivi890g00007 1954 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 406 IPR027417 -
Vivi890g00007 1954 Coils Coil 1889 1909 - -
Vivi890g00007 1954 MobiDBLite consensus disorder prediction 1482 1512 - -
Vivi890g00007 1954 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 908 1155 - -
Vivi890g00007 1954 SUPERFAMILY RNI-like 543 860 - -
Vivi890g00007 1954 Coils Coil 34 54 - -
Vivi890g00007 1954 Gene3D - 133 296 IPR027417 -
Vivi890g00007 1954 Pfam NB-ARC domain 157 393 IPR002182 GO:0043531
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi890g00007 169 836 WRKY Transcription Factor Family AT5G45050 24.029 2.48e-09 60.8