Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi890g00005 ATGGGGAGTTTCTTGCTTGACTTGGCGAAACCATATGTGGAGCAATTGGTAAATAAGGTGATTGCAGAATCAAGGTATATTTGTTGCTTCACATGCATTGCTAAGGATTTCGAAGAAGAAAAAGTTAGATTAGAAGTAGAAAGGGCAACTTTTGAGCGACACATTGAAGAGGCAACAAGAGGAGGGGAAGTTATTCTACCTGATGCTCGTGCTTGGAAAGAAGAAGTTGATCAGCTCATTCAAGAAGATACCAAAAAAAGACAAAAATGTTTTTTTGAATCCTGTCCTCATTGCTTATGGAGATATACTAGAGGAAAATTTCTTGTAAATAAGAAGGAGCGAATTAAAATATTGATGGCAACAAGAAAGGAACTTACAATTGGACTCCCTGCTCATCTTCCTGATATTGAACGATACACGACCCAACACTATGTGCATCTTAAAAGCAGAGAAACTCAATACACAGAGCTTTTGGCTGAACTCAAAGATGACAACAATTATATAATTGGGTTGCATGGAATGGGGGGTACAGGTAAAACTACATTGATCAAGAAAGTGGGTAAGGAACTTAAGGAATTAAAACAATTTACTCTGGTCATTGTTACGACAGTGTCATCATCTCCCAATATTAAAAAGATTCAAGATGATATTGCCAAGCCTTTGGGATTGAAATTTGATAACTGCAATGATACAGATCGACCTGAAAAACTATGGAACAGATTAACCAATGGTGAGAAGATTCTTCTAATATTGGATGATGTGTGGGACAAACTCAATTTTGAAGAAATTGGAATTCCGTCTAGTGACAATCACAAAGGTTGTAGGGTTATTATAACCACACGCAGTCAGTTGGTGTGCCACAAATTAGGGTGCAATAAGATAATCCAACTAAATCTCATATCTAAAGAAGATGCATGGATCATGTTCAAAAAGTATGCCGATCTATGTGAAACCACCTCAACGCAATTTTTTCTTGACAGGGGCCGTAAAATTGCAAATGAATGCAAAAACCTACCTATTGCAATTGTTGTTATCGCTAGTAGTTTGAAGGGCAAAAAACTTCAGCAACATCGAGAGGAATGGGACATGGCCTTAAAATTCTTAAAAAAAGACATCTCAAGGCACAAGGATGATGATGACGTTCTTGAAATTTATAAATGCTTGAAGTTTAGCTATGATAAGTTGGATGAAGAGGCCAAGAATCTATTCCTTTTGTGTTCTGTATTTCGAGAAGATGAAGAAATTCTAATTGAAAGTTTAGCTAGACATGCCATCGGAGGAGGCCTTTTTGGGGAAGTTTATGGCAGCTACGAAGAAACCCGAAGACAATTAGTTATATCCAAAAACAAACTCCTAGATTCTTGTTTATTGTTGGAGGCCGGTCAAAGGAGAGTGAAAATGCACGACTTCGTTCGTGATGCAGCCCAATGGATAGCGAACAAAGAGATTCAAACAAGAAAAGTGTATGACAAAAATCAAAAGGAAATGATTGAAGAGGAGAAAAATCTTAAATATTTGTTATGCGTAAGCGATGTAAAGGAGATCTTTTCTTGTAAGTTTGATGGTTCCAAGATTAAGATTCTAATTGTCATCATGCATATGCCTTTTCATGGAGAAATTGAAGTCCCAAATTCATTTTTTGAAAATAATACCAGCCTTCGAGTTTTTAATTTACGTAGTGGTCTTGGTTGCGCAGCTATTATATCATTACCTCAATCAATGCAACAATTGAAGAATATCCGATCTCTTATGTTTGCACAGTGTCTTTTGGGTGACATCTCTATCTTTGGAAAGCTGCAAAGTCTTGAAGAACTTGATTTGTATCTATGTGAAATTAATGAATTGCCTAATGAAATTGCAGAACTAAAGAAATTTAGATTTTTGAAATTGGAATGGTGTACATTTGGTGGGAATAATCCATTTGAAGTGATTAAAAGATGCTCATCACTTCAAGAGTTGGTCGTAAAATATAATTACGATATTCATGGAGAAATAACTTTCCCTAAATTGCAGTGGTTTCATGTAAGTGATGAAGATACAACTTATTCTTCACTGTCAAAGTATGTGTCTATGATATATTCGGATAATAAGGTTTTCCTATCTGAAACAACACTCAAACATTGTATGCAAGAAGCAGAGGTTCTTAGACTAACAAGTATTAAGGGGGAATGGAGAAATATCATACCTGATATTGTTCATATGGATCACGGTATGAATAATCTTGTTGAGCTTGACTTACATTCCACTTCACAACTAAAGTTCCTTATTTACACTAAGGATCCTCATTCTCAAATATCAAATGTTTTCTCCAAGTTGGTTCGACTAGTTCTGAATGATATGGACAGTTTGGAAGAATTGTGCAAGGGTTCTTTTTCTGCTGACTCTTTTAAGAGTTTAGAGAGTCTATCTATATTTAATTGCAAACAGTTGCGAAGCTTATCAAGGATTGCAAACCAATGCAATTTAAAGAGTGTGTCATTGATGAATTGTCCCATGTTGAGCTCCTTATTTGAAGTGTCAACTTCTCATAATCTAGTGTTGTTGGAGATATTGATAGTAATTGATTGTCAGAATCTTGAATACTTAATAAAAGATGAAAGAAAAGGGGAAACATTTGAAAGCAACAGTAGCAATCCAATGTTTATGAAATTGAAAGATCTCATAATTGCGGGCTGTCCAAAATTTGAAATAATATTTCCGCTTATCTCTGCTCATGATCTTCCTGCACTAAAATCTGTAGGGGTGGAAAGATGTGATAAGTTGAAATACATATTTGGTCAATATGTCAAACTTGGGTCCCTAGAAGATATGAAGCTTGGCTGTGTACCCAATTTTATTGACATTTTTCCAGAATGTAATCGTACAATGTCTTTCTCCATTAACAGGTCATCTCCTATTTCAATATCTGCTTCCAAGCCAACTACACACTCAAACACTATCAAATGGAGCATCTTGTCATGGACTGATATGTATTGTTGTGGTAAAAAATTGAGGAGTACCACAAGTTCTAAACTTCCATTGATTGATGAGAATCAACCGCACACTAAAGTAATGGAATCAAACTCAAATTGTCTTAGCATAAACATATGGGAGCGTGCTCAATGTCTTTCAAGACAATCAAAGATCATGTGCAATATTAAAAAGATTGAGTTGAGTAATTTGAAGAAGATAAAATCAGTATTTGTCCTATCTATTACTCCAAAAATGTTATTGGAAACTTTGATACTTGAAAAATGTCATGAATTGAAGCACATCATAATAGACACGGGAGATCACGATAGTACAGGTGGAAATACCCTTGGCAATGTGTTCCCAAAATTAAAAGAGCTTACCATTAAGGATTGCATGCAATTAGAGTACATATTTGGACACTACACTAATGATCATCAAAACCACACTGAATATCATCTTCATCTTTCGTCATTGGAACGTGTCTATCTTTGGGAGCTGCAAAGCTTAGTTGCCATTTGCCCCAAACAATATCATATAACATTGCCAGTTTTGAATCAACTTGTACTCAAATATTGCTCGTGGGATGCTAATATAAAGTCTTTTGGTACAATCATGAAGGATTTGCTTGCTTTGGAAGACCTTGTGTTAACTAACTCCAAAATAGAAAGTATATTTTGTGTCAATGAAGTAAATGAACAACAAGTGAACATAGGATTGCAAAATATTGAGTTGGAAAATTTGAATGTGATGGTGTGTCCTTTTGTGGGTCCCAAAAATTCTTTTTTCCTCCCGAATCTAACAAAGATGAGAATTATTGGATGTGAAAAATTGCAAATAATTTTCCCTGCTTCTATATTAAGATACCTACCACAATTGGATGAGTTAATGATAGGTGACTGTGAGGAGTTGCAACATATCTTCCAAGATGATTTGGAGAATCAAAACATGTCGTCTTCAACAACATGCTTCCCAAAGCTAAAAGCACTTTCTGTAAAAAAATGCAATAAATTGAAATATGTGTTTCCAGTCTCTATTTGTAACCAACTTCCTGAGTTAAGGGTTCTAATCATAACAAAAGCAAAAGAGTTAAAGGAAATATTTAAAAGTAGTCAAGGTGATGGAATTGAGATTGTCAGGATTCCAAATTTGTATTTTGTAGCAACTGTGGGTCTACCAAGCCTCTTCCAGACACAGGAAATTCAATTTCAGAGAGCTGAATATCGTTTAATAAAGAATTGTGATAAACTCTCTTTGACTTCAACAACAAGAATACCCCACTTCTGGAGTTTTTCTCATGATATTCCAGATTTTGAAAGGAATTCTTATTTGTACAATCGAATTCAAGAGTTAGTTACTGAGATTGAAGTTGAAGCAGCATCAAAAAATAAGTGGACTTCTCCACAGTTGAAAGTAAAACAAACACAAAAGACAGACAAAGAACTTGTTGAAAATGTTGCTGGTCAAGTGACACCATTAGTAGCAAAACTACCAACAAATTCAGAAGCACCGAGGAATGAACAATCAGTTGATCAACAAAGTCCACTTGAAGAAACTGATGCTACTGTCACACCTTCACACGTAAATAAATTGGAGGGTTCAATGTCTGAAAAAGCTGTAGGAACAAAGAATGTGTCACCTAAACAAAAGGAGTTGTTAAATGAACAATCAACAACCCAAGGAGAATCTCATGCTACAATTAAACCTTCTCAGGAAAACAATGGTTCAAGGTCAGAAAAAATAGCAGCAGCCAATTTGTCCACCAATTCAGGAACAAAGAATGAGTCACCTATACAAAAGGGTGTCAAGATAAGTGTTGAACAAGGAGCTACATCAACCAATTCCATAGAAATAACATCATCAGGTCCAACAGTTACTTCTGAGCATAATAGTTTATCACAGGCACCAATTAATGAACGAACAATGGATCAACAAACTTCACTTGAAGAAACTGATGCTACTGTCACACCTTCACAGGGTTCATCGTCAGAAAAAATAGCAGCAGCAACTTTATCCCCCATCTCTGAAACAAAGAATGAGTCACCTAAACAAAAGGATATCAAAATAAGTGTTGAAGGAGGAGCTGCATCAACTAATGTTAAGACATTAGCAGCATCAACTTCTAAGCGTGAAAAACTTTCTCATGAATATGGTAATGGCCAAACAGCCATTCAATCTTTTTCAATTTCCACAAAAGAGCCACTTGCTATGGATGTTGTTGATCATGGAGGCCCACTGCAAACAAATCAGATTAAAAATCTAGGGGACACTTCTCAAATAGTAGAAGATTCAGGTTCTTCTTTATTTGTCAGGAGGGAGCTTGAGCAACTAGTCTCTGAGAATCATTTGAATTATGAAACCTTGTCTCTATTGACAGATTTCTTTGTGAAGCATCCTTCTATTCTTTTAAAGGATGCTTTACTGACTAATAGATTCAAGGGTTATGCCTACACTTGCCTTGCAGATTTGTTGAAATTCCTCCTAACACATAGTGTGTTGGATGTCTTAGGTTCAAGTCATTCTGAATTTGTTAACTTATTACAAGTTATGCGCAATTTTCCTTTTAACAACGATTGGTTGGATGGTGTTGAAAAACGCGCTTTATTTCCTGATTTACAATTCTCTCAAGATGCGATGCAAAAACTATTGGATTCTAAGAAACAAGTTACCAAGGAAGTCGAAGAGATGCGTTTGAAGTTGTATTTTGTCAATCAACATGCAGAAGATATCAAGCATCAATTGAGATCCTCCGAAGCTGTATTGGCGAGTATCATTAAACAAGAGGAACAGGTTTTAGAAACTACAGCAGCTTTAAGTGTTCCTCTTGGCTATTAG 5784 0.3568 MGSFLLDLAKPYVEQLVNKVIAESRYICCFTCIAKDFEEEKVRLEVERATFERHIEEATRGGEVILPDARAWKEEVDQLIQEDTKKRQKCFFESCPHCLWRYTRGKFLVNKKERIKILMATRKELTIGLPAHLPDIERYTTQHYVHLKSRETQYTELLAELKDDNNYIIGLHGMGGTGKTTLIKKVGKELKELKQFTLVIVTTVSSSPNIKKIQDDIAKPLGLKFDNCNDTDRPEKLWNRLTNGEKILLILDDVWDKLNFEEIGIPSSDNHKGCRVIITTRSQLVCHKLGCNKIIQLNLISKEDAWIMFKKYADLCETTSTQFFLDRGRKIANECKNLPIAIVVIASSLKGKKLQQHREEWDMALKFLKKDISRHKDDDDVLEIYKCLKFSYDKLDEEAKNLFLLCSVFREDEEILIESLARHAIGGGLFGEVYGSYEETRRQLVISKNKLLDSCLLLEAGQRRVKMHDFVRDAAQWIANKEIQTRKVYDKNQKEMIEEEKNLKYLLCVSDVKEIFSCKFDGSKIKILIVIMHMPFHGEIEVPNSFFENNTSLRVFNLRSGLGCAAIISLPQSMQQLKNIRSLMFAQCLLGDISIFGKLQSLEELDLYLCEINELPNEIAELKKFRFLKLEWCTFGGNNPFEVIKRCSSLQELVVKYNYDIHGEITFPKLQWFHVSDEDTTYSSLSKYVSMIYSDNKVFLSETTLKHCMQEAEVLRLTSIKGEWRNIIPDIVHMDHGMNNLVELDLHSTSQLKFLIYTKDPHSQISNVFSKLVRLVLNDMDSLEELCKGSFSADSFKSLESLSIFNCKQLRSLSRIANQCNLKSVSLMNCPMLSSLFEVSTSHNLVLLEILIVIDCQNLEYLIKDERKGETFESNSSNPMFMKLKDLIIAGCPKFEIIFPLISAHDLPALKSVGVERCDKLKYIFGQYVKLGSLEDMKLGCVPNFIDIFPECNRTMSFSINRSSPISISASKPTTHSNTIKWSILSWTDMYCCGKKLRSTTSSKLPLIDENQPHTKVMESNSNCLSINIWERAQCLSRQSKIMCNIKKIELSNLKKIKSVFVLSITPKMLLETLILEKCHELKHIIIDTGDHDSTGGNTLGNVFPKLKELTIKDCMQLEYIFGHYTNDHQNHTEYHLHLSSLERVYLWELQSLVAICPKQYHITLPVLNQLVLKYCSWDANIKSFGTIMKDLLALEDLVLTNSKIESIFCVNEVNEQQVNIGLQNIELENLNVMVCPFVGPKNSFFLPNLTKMRIIGCEKLQIIFPASILRYLPQLDELMIGDCEELQHIFQDDLENQNMSSSTTCFPKLKALSVKKCNKLKYVFPVSICNQLPELRVLIITKAKELKEIFKSSQGDGIEIVRIPNLYFVATVGLPSLFQTQEIQFQRAEYRLIKNCDKLSLTSTTRIPHFWSFSHDIPDFERNSYLYNRIQELVTEIEVEAASKNKWTSPQLKVKQTQKTDKELVENVAGQVTPLVAKLPTNSEAPRNEQSVDQQSPLEETDATVTPSHVNKLEGSMSEKAVGTKNVSPKQKELLNEQSTTQGESHATIKPSQENNGSRSEKIAAANLSTNSGTKNESPIQKGVKISVEQGATSTNSIEITSSGPTVTSEHNSLSQAPINERTMDQQTSLEETDATVTPSQGSSSEKIAAATLSPISETKNESPKQKDIKISVEGGAASTNVKTLAASTSKREKLSHEYGNGQTAIQSFSISTKEPLAMDVVDHGGPLQTNQIKNLGDTSQIVEDSGSSLFVRRELEQLVSENHLNYETLSLLTDFFVKHPSILLKDALLTNRFKGYAYTCLADLLKFLLTHSVLDVLGSSHSEFVNLLQVMRNFPFNNDWLDGVEKRALFPDLQFSQDAMQKLLDSKKQVTKEVEEMRLKLYFVNQHAEDIKHQLRSSEAVLASIIKQEEQVLETTAALSVPLGY 1927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi890g00005 1927 Gene3D Ribonuclease Inhibitor 815 959 IPR032675 -
Vivi890g00005 1927 Gene3D Ribonuclease Inhibitor 1138 1356 IPR032675 -
Vivi890g00005 1927 MobiDBLite consensus disorder prediction 1522 1561 - -
Vivi890g00005 1927 Pfam NB-ARC domain 157 393 IPR002182 GO:0043531
Vivi890g00005 1927 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 406 IPR027417 -
Vivi890g00005 1927 MobiDBLite consensus disorder prediction 1484 1514 - -
Vivi890g00005 1927 PRINTS Disease resistance protein signature 736 752 - -
Vivi890g00005 1927 PRINTS Disease resistance protein signature 168 183 - -
Vivi890g00005 1927 PRINTS Disease resistance protein signature 335 349 - -
Vivi890g00005 1927 PRINTS Disease resistance protein signature 241 255 - -
Vivi890g00005 1927 MobiDBLite consensus disorder prediction 1593 1661 - -
Vivi890g00005 1927 SUPERFAMILY L domain-like 466 923 - -
Vivi890g00005 1927 Coils Coil 1862 1882 - -
Vivi890g00005 1927 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 908 1157 - -
Vivi890g00005 1927 MobiDBLite consensus disorder prediction 1593 1673 - -
Vivi890g00005 1927 Gene3D Ribonuclease Inhibitor 536 814 IPR032675 -
Vivi890g00005 1927 FunFam Probable disease resistance protein At1g61300 132 293 - -
Vivi890g00005 1927 Gene3D - 300 396 IPR042197 -
Vivi890g00005 1927 MobiDBLite consensus disorder prediction 1476 1561 - -
Vivi890g00005 1927 Coils Coil 34 54 - -
Vivi890g00005 1927 Gene3D - 133 296 IPR027417 -
Vivi890g00005 1927 SUPERFAMILY RNI-like 1138 1342 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi890g00005 169 836 WRKY Transcription Factor Family AT5G45050 24.029 2.77e-09 60.5