Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi890g00003 ATGGGGAGTTTCTTGCTTGACTTGGCGAAACCATATGTGGAGCAATTGGTAAATAAGGTGATTGCAGAATCAAGGTATATTTGTTGCTTCACATGCATTGCTAAGGATTTCGAAGAAGAAAAAGTTAGATTAGAAGTAGAAAGGGCAACTTTTGAGCGACACATTGAAGAGGCAACAAGAGGAGGGGAAGTTATTCTACCTGATGCTCGTGCTTGGAAAGAAGAAGTTGATCAGCTCATTCAAGAAGATACCAAAAAAAGACAAAAATGTTTTTTTGAATCCTGTCCTCATTGCTTATGGAGATATACTAGAGGAAAATTTCTTGTAAATAAGAAGGAGCGAATTAAAATATTGATGGCAACAAGAAAGGAACTTACAATTGGACTCCCTGCTCATCTTCCTGATATTGAACGATACACGACCCAACACTATGTGCATCTTAAAAGCAGAGAAACTCAATACACAGAGCTTTTGGCTGAACTCAAAGATGACAACAATTATATAATTGGGTTGCATGGAATGGGGGGTACAGGTAAAACTACATTGATCAAGAAAGTGGGTAAGGAACTTAAGGAATTAAAACAATTTACTCTGGTCATTGTTACGACAGTGTCATCATCTCCCAATATTAAAAAGATTCAAGATGATATTGCCAAGCCTTTGGGATTGAAATTTGATAACTGCAATGATACAGATCGACCTGAAAAACTATGGAACAGATTAACCAATGGTGAGAAGATTCTTCTAATATTGGATGATGTGTGGGACAAACTCAATTTTGAAGAAATTGGAATTCCGTCTAGTGACAATCACAAAGGTTGTAGGGTTATTATAACCACACGCAGTCAGTTGGTGTGCCACAAATTAGGGTGCAATAAGATAATCCAACTAAATCTCATATCTAAAGAAGATGCATGGATCATGTTCAAAAAGTATGCCGATCTATGTGAAACCACCTCAACGCAATTTTTTCTTGACAGGGGCCGTAAAATTGCAAATGAATGCAAAAACCTACCTATTGCAATTGTTGTTATCGCTAGTAGTTTGAAGGGCAAAAAACTTCAGCAACATCGAGAGGAATGGGACATGGCCTTAAAATTCTTAAAAAAAGACATCTCAAGGCACAAGGATGATGATGACGTTCTTGAAATTTATAAATGCTTGAAGTTTAGCTATGATAAGTTGGATGAAGAGGCCAAGAATCTATTCCTTTTGTGTTCTGTATTTCGAGAAGATGAAGAAATTCTAATTGAAAGTTTAGCTAGACATGCCATCGGAGGAGGCCTTTTTGGGGAAGTTTATGGCAGCTACGAAGAAACCCGAAGACAATTAGTTATATCCAAAAACAAACTCCTAGATTCTTGTTTATTGTTGGAGGCCGGTCAAAGGAGAGTGAAAATGCACGACTTCGTTCGTGATGCAGCCCAATGGATAGCGAACAAAGAGATTCAAACAAGAAAAGTGTATGACAAAAATCAAAAGGAAATGATTGAAGAGGAGAAAAATCTTAAATATTTGTTATGCGTAAGCGATGTAAAGGAGATCTTTTCTTGTAAGTTTGATGGTTCCAAGATTAAGATTCTAATTGTCATCATGCATATGCCTTTTCATGGAGAAATTGAAGTCCCAAATTCATTTTTTGAAAATAATACCAGCCTTCGAGTTTTTAATTTACGTAGTGGTCTTGGTTGCGCAGCTATTATATCATTACCTCAATCAATGCAACAATTGAAGAATATCCGATCTCTTATGTTTGCACAGTGTCTTTTGGGTGACATCTCTATCTTTGGAAAGCTGCAAAGTCTTGAAGAACTTGATTTGTATCTATGTGAAATTAATGAATTGCCTAATGAAATTGCAGAACTAAAGAAATTTAGATTTTTGAAATTGGAATGGTGTACATTTGGTGGGAATAATCCATTTGAAGTGATTAAAAGATGCTCATCACTTCAAGAGTTGGTCGTAAAATATAATTACGATATTCATGGAGAAATAACTTTCCCTAAATTGCAGTGGTTTCATGTAAGTGATGAAGATACAACTTATTCTTCACTGTCAAAGTATGTGTCTATGATATATTCGGATAATAAGGTTTTCCTATCTGAAACAACACTCAAACATTGTATGCAAGAAGCAGAGGTTCTTAGACTAACAAGTATTAAGGGGGAATGGAGAAATATCATACCTGATATTGTTCATATGGATCACGGTATGAATAATCTTGTTGAGCTTGACTTACATTCCACTTCACAACTAAAGTTCCTTATTTACACTAAGGATCCTCATTCTCAAATATCAAATGTTTTCTCCAAGTTGGTTCGACTAGTTCTGAATGATATGGACAGTTTGGAAGAATTGTGCAAGGGTTCTTTTTCTGCTGACTCTTTTAAGAGTTTAGAGAGTCTATCTATATTTAATTGCAAACAGTTGCGAAGCTTATCAAGGATTGCAAACCAATGCAATTTAAAGAGTGTGTCATTGATGAATTGTCCCATGTTGAGCTCCTTATTTGAAGTGTCAACTTCTCATAATCTAGTGTTGTTGGAGATATTGATAGTAATTGATTGTCAGAATCTTGAATACTTAATAAAAGATGAAAGAAAAGGGGAAACATTTGAAAGCAACAGTAGCAATCCAATGTTTATGAAATTGAAAGATCTCATAATTGCGGGCTGTCCAAAATTTGAAATAATATTTCCGCTTATCTCTGCTCATGATCTTCCTGCACTAAAATCTGTAGGGGTGGAAAGATGTGATAAGTTGAAATACATATTTGGTCAATATGTCAAACTTGGGTCCCTAGAAGATATGAAGCTTGGCTGTGTACCCAATTTTATTGACATTTTTCCAGAATGTAATCGTACAATGTCTTTCTCCATTAACAGGTCATCTCCTATTTCAATATCTGCTTCCAAGCCAACTACACACTCAAACACTATCAAATGGAGCATCTTGTCATGGACTGATATGTATTGTTGTGGTAAAAAATTGAGGAGTACCACAAGTTCTAAACTTCCATTGATTGATGAGAATCAACCGCACACTAAAGTAATGGAATCAAACTCAAATTGTCTTAGCATAAACATATGGGAGCGTGCTCAATGTCTTTCAAGACAATCAAAGATCATGTGCAATATTAAAAAGATTGAGTTGAGTAATTTGAAGAAGATAAAATCAGTATTTGTCCTATCTATTACTCCAAAAATGTTATTGGAAACTTTGATACTTGAAAAATGTCATGAATTGAAGCACATCATAATAGACACGGGAGATCACGATAGTACAGGTGGAAATACCCTTGGCAATGTGTTCCCAAAATTAAAAGAGCTTACCATTAAGGATTGCATGCAATTAGAGTACATATTTGGACACTACACTAATGATCATCAAAACCACACTGAATATCATCTTCATCTTTCGTCATTGGAACGTGTCTATCTTTGGGAGCTGCAAAGCTTAGTTGCCATTTGCCCCAAACAATATCATATAACATTGCCAGTTTTGAATCAACTTGTACTCAAATATTGCTCGTGGGATGCTAATATAAAGTCTTTTGGTACAATCATGAAGGATTTGCTTGCTTTGGAAGACCTTGTGTTAACTAACTCCAAAATAGAAAGTATATTTTGTGTCAATGAAGTAAATGAACAACAAGTGAACATAGGATTGCAAAATATTGAGTTGGAAAATTTGAATGTGATGGTGTGTCCTTTTGTGGGTCCCAAAAATTCTTTTTTCCTCCCGAATCTAACAAAGATGAGAATTATTGGATGTGAAAAATTGCAAATAATTTTCCCTGCTTCTATATTAAGATACCTACCACAATTGGATGAGTTAATGATAGGTGACTGTGAGGAGTTGCAACATATCTTCCAAGATGATTTGGAGAATCAAAACATGTCGTCTTCAACAACATGCTTCCCAAAGCTAAAAGCACTTTCTGTAAAAAAATGCAATAAATTGAAATATGTGTTTCCAGTCTCTATTTGTAACCAACTTCCTGAGTTAAGGGTTCTAATCATAACAAAAGCAAAAGAGTTAAAGGAAATATTTAAAAGTAGTCAAGGTGATGGAATTGAGATTGTCAGGATTCCAAATTTGTATTTTGTAGCAACTGTGGGTCTACCAAGCCTCTTCCAGACACAGGAAATTCAATTTCAGAGAGCTGAATATCGTTTAATAAAGAATTGTGATAAACTCTCTTTGACTTCAACAACAAGAATACCCCACTTCTGGAGTTTTTCTCATGATATTCCAGATTTTGAAAGGAATTCTTATTTGTACAATCGAATTCAAGAGTTAGTTACTGAGATTGAAGTTGAAGCAGCATCAAAAAATAAGTGGACTTCTCCACAGTTGAAAGTAAAACAAACACAAAAGACAGACAAAGAACTTGTTGAAAATGTTGCTGGTCAAGTGACACCATTAGTAGCAAAACTACCAACAAATTCAGAAGCACCGAGGAATGAACAATCAGTTGATCAACAAAGTCCACTTGAAGAAACTGATGCTACTGTCACACCTTCACACGTAAATAAATTGGAGGGTTCAATGTCTGAAAAAGCTGTAGGAACAAAGAATGTGTCACCTAAACAAAAGGAGTTGTTAAATGAACAATCAACAACCCAAGGAGAATCTCATGCTACAATTAAACCTTCTCAGGAAAACAATGGTTCAAGGTCAGAAAAAATAGCAGCAGCCAATTTGTCCACCAATTCAGGAACAAAGAATGAGTCACCTATACAAAAGGGTGTCAAGATAAGTGTTGAACAAGGAGCTACATCAACCAATTCCATAGAAATAACATCATCAGGTCCAACAGTTACTTCTGAGCATAATAGTTTATCACAGGCACCAATTAATGAACGAACAATGGATCAACAAACTTCACTTGAAGAAACTGATGCTACTGTCACACCTTCACAGGAGTTGATAAATGAACAATCAACGACCCAACAACAATCACGTGGAGAATCTCAAGCAACAATTAAACCTTCTAAGGGAAACAATGGTTCATCGTCAGAAAAAATAGCAGCAGCAACTTTATCCCCCATCTCTGAAACAAAGAATGAGTCACCTAAACAAAAGGATATCAAAATAAGTGTTGAAGGAGGAGCTGCATCAACTAATGTTAAGACATTAGCAGCATCAACTTCTAAGCGTGAAAAACTTTCTCATGAATATGGTAATGGCCAAACAGCCATTCAATCTTTTTCAATTTCCACAAAAGAGCCACTTGCTATGGATGTTGTTGATCATGGAGGCCCACTGCAAACAAATCAGATTAAAAATCTAGGGGACACTTCTCAAATAGTAGAAGATTCAGGTTCTTCTTTATTTGTCAGGAGGGAGCTTGAGCAACTAGTCTCTGAGAATCATTTGAATTATGAAACCTTGTCTCTATTGACAGATTTCTTTGTGAAGCATCCTTCTATTCTTTTAAAGGATGCTTTACTGACTAATAGATTCAAGGGTTATGCCTACACTTGCCTTGCAGATTTGTTGAAATTCCTCCTAACACATAGTGTGTTGGATGTCTTAGGTTCAAGTCATTCTGAATTTGTTAACTTATTACAAGTTATGCGCAATTTTCCTTTTAACAACGATTGGTTGGATGGTGTTGAAAAACGCGCTTTATTTCCTGATTTACAATTCTCTCAAGATGCGATGCAAAAACTATTGGATTCTAAGAAACAAGTTACCAAGGAAGTCGAAGAGATGCGTTTGAAGTTGTATTTTGTCAATCAACATGCAGAAGATATCAAGCATCAATTGAGATCCTCCGAAGCTGTATTGGCGAGTATCATTAAACAAGAGGAACAGGTTTTAGAAACTACAGCAGCTTTAAGTGTTCCTCTTGGCTATTAG 5868 0.357 MGSFLLDLAKPYVEQLVNKVIAESRYICCFTCIAKDFEEEKVRLEVERATFERHIEEATRGGEVILPDARAWKEEVDQLIQEDTKKRQKCFFESCPHCLWRYTRGKFLVNKKERIKILMATRKELTIGLPAHLPDIERYTTQHYVHLKSRETQYTELLAELKDDNNYIIGLHGMGGTGKTTLIKKVGKELKELKQFTLVIVTTVSSSPNIKKIQDDIAKPLGLKFDNCNDTDRPEKLWNRLTNGEKILLILDDVWDKLNFEEIGIPSSDNHKGCRVIITTRSQLVCHKLGCNKIIQLNLISKEDAWIMFKKYADLCETTSTQFFLDRGRKIANECKNLPIAIVVIASSLKGKKLQQHREEWDMALKFLKKDISRHKDDDDVLEIYKCLKFSYDKLDEEAKNLFLLCSVFREDEEILIESLARHAIGGGLFGEVYGSYEETRRQLVISKNKLLDSCLLLEAGQRRVKMHDFVRDAAQWIANKEIQTRKVYDKNQKEMIEEEKNLKYLLCVSDVKEIFSCKFDGSKIKILIVIMHMPFHGEIEVPNSFFENNTSLRVFNLRSGLGCAAIISLPQSMQQLKNIRSLMFAQCLLGDISIFGKLQSLEELDLYLCEINELPNEIAELKKFRFLKLEWCTFGGNNPFEVIKRCSSLQELVVKYNYDIHGEITFPKLQWFHVSDEDTTYSSLSKYVSMIYSDNKVFLSETTLKHCMQEAEVLRLTSIKGEWRNIIPDIVHMDHGMNNLVELDLHSTSQLKFLIYTKDPHSQISNVFSKLVRLVLNDMDSLEELCKGSFSADSFKSLESLSIFNCKQLRSLSRIANQCNLKSVSLMNCPMLSSLFEVSTSHNLVLLEILIVIDCQNLEYLIKDERKGETFESNSSNPMFMKLKDLIIAGCPKFEIIFPLISAHDLPALKSVGVERCDKLKYIFGQYVKLGSLEDMKLGCVPNFIDIFPECNRTMSFSINRSSPISISASKPTTHSNTIKWSILSWTDMYCCGKKLRSTTSSKLPLIDENQPHTKVMESNSNCLSINIWERAQCLSRQSKIMCNIKKIELSNLKKIKSVFVLSITPKMLLETLILEKCHELKHIIIDTGDHDSTGGNTLGNVFPKLKELTIKDCMQLEYIFGHYTNDHQNHTEYHLHLSSLERVYLWELQSLVAICPKQYHITLPVLNQLVLKYCSWDANIKSFGTIMKDLLALEDLVLTNSKIESIFCVNEVNEQQVNIGLQNIELENLNVMVCPFVGPKNSFFLPNLTKMRIIGCEKLQIIFPASILRYLPQLDELMIGDCEELQHIFQDDLENQNMSSSTTCFPKLKALSVKKCNKLKYVFPVSICNQLPELRVLIITKAKELKEIFKSSQGDGIEIVRIPNLYFVATVGLPSLFQTQEIQFQRAEYRLIKNCDKLSLTSTTRIPHFWSFSHDIPDFERNSYLYNRIQELVTEIEVEAASKNKWTSPQLKVKQTQKTDKELVENVAGQVTPLVAKLPTNSEAPRNEQSVDQQSPLEETDATVTPSHVNKLEGSMSEKAVGTKNVSPKQKELLNEQSTTQGESHATIKPSQENNGSRSEKIAAANLSTNSGTKNESPIQKGVKISVEQGATSTNSIEITSSGPTVTSEHNSLSQAPINERTMDQQTSLEETDATVTPSQELINEQSTTQQQSRGESQATIKPSKGNNGSSSEKIAAATLSPISETKNESPKQKDIKISVEGGAASTNVKTLAASTSKREKLSHEYGNGQTAIQSFSISTKEPLAMDVVDHGGPLQTNQIKNLGDTSQIVEDSGSSLFVRRELEQLVSENHLNYETLSLLTDFFVKHPSILLKDALLTNRFKGYAYTCLADLLKFLLTHSVLDVLGSSHSEFVNLLQVMRNFPFNNDWLDGVEKRALFPDLQFSQDAMQKLLDSKKQVTKEVEEMRLKLYFVNQHAEDIKHQLRSSEAVLASIIKQEEQVLETTAALSVPLGY 1955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi890g00003 1955 MobiDBLite consensus disorder prediction 1522 1561 - -
Vivi890g00003 1955 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 406 IPR027417 -
Vivi890g00003 1955 MobiDBLite consensus disorder prediction 1682 1701 - -
Vivi890g00003 1955 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 908 1157 - -
Vivi890g00003 1955 MobiDBLite consensus disorder prediction 1593 1675 - -
Vivi890g00003 1955 Gene3D Ribonuclease Inhibitor 698 868 IPR032675 -
Vivi890g00003 1955 Gene3D Ribonuclease Inhibitor 1138 1356 IPR032675 -
Vivi890g00003 1955 FunFam Probable disease resistance protein At1g61300 132 293 - -
Vivi890g00003 1955 Gene3D - 300 396 IPR042197 -
Vivi890g00003 1955 MobiDBLite consensus disorder prediction 1484 1514 - -
Vivi890g00003 1955 SUPERFAMILY RNI-like 1074 1347 - -
Vivi890g00003 1955 Coils Coil 1890 1910 - -
Vivi890g00003 1955 SUPERFAMILY L domain-like 466 923 - -
Vivi890g00003 1955 Gene3D Ribonuclease Inhibitor 444 697 IPR032675 -
Vivi890g00003 1955 PRINTS Disease resistance protein signature 241 255 - -
Vivi890g00003 1955 PRINTS Disease resistance protein signature 335 349 - -
Vivi890g00003 1955 PRINTS Disease resistance protein signature 168 183 - -
Vivi890g00003 1955 PRINTS Disease resistance protein signature 736 752 - -
Vivi890g00003 1955 MobiDBLite consensus disorder prediction 1476 1561 - -
Vivi890g00003 1955 Coils Coil 34 54 - -
Vivi890g00003 1955 Gene3D - 133 296 IPR027417 -
Vivi890g00003 1955 Pfam NB-ARC domain 157 393 IPR002182 GO:0043531
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi890g00003 169 836 WRKY Transcription Factor Family AT5G45050 24.029 2.59e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi890g00003 - - vvo:131637508 3880.1