Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi88g00002 ATGGACTCACCAATGGAGTTTTGGGGCGTTGAGGTTAAAGTTGGAGAATCTGTTAAAGTTGATCCAAAGGATAACTTTGAAGGATACATCCATATTTCTCAGGTTGCACTTGGAGAGGTTAAGAAAGGAAAAGCAAGTGAGCCTGTTGTTGTGTATGTGAAAGTTGAGGATCAGAAGATTGTTCTGGGAACTCTTAAGAAGGATGAGATTCCTCAGATTTCTATAGATATTGTTCTGGACCAGCAGTCTGAGCTTTCTCATAACTCCAAGAATGCTTCTGTTTATTTTTCAGGATACAAAGTTTTTAGCCCTGAAGATGATGATTCCGACAGCTTTTCTGACTCTTCTGATAGCGAAGAAGAACTTGTTCCTTTGAAGGAAGATGCTCAAGCAGTAAAGGAGGCTGCTAAATCTGGAAAACCTGCAGCTGATGCATTGACAAAGCAAGTCAAGGTTGTTGATCCAAAGAATGGCAAGACTGTTGATCCAGAGAAAAATGAAGGTGACTCGGATGAGTCCGATTCAGATTATTCTGAGGATGAAATTTCTGATGATGAGATCGATACTGATGCTCTTACTGGTAGTAGTGATGAAGAGACTCCTGCTAAAAAGATTGATACTGAAAGTGATAAGAGTGATCAAAATGATACTTCTAAAAATAGCGATACTGATACTACTGATATGGATAGTGATACAGATAGTGATGAAGAGACTCTTGCGAAGAAGATTGATAGTGATGAGAGTGAGAGTGAGGAGGACGCTACTCCTAAAAGTTTTGATGCTGATACTGACAGTGACAGTGATACTGATAGTGATGCTGAGAGTGAAGAGGAGGCTCCTGCTAAGAAGGTGACTCAGGGCAAGAACAACAAGAGGGGAATTGGTGCTGGATCCCAAACTCCAGTTCCTGCCAAGAAAGCTAAGAATGGTACTCCTGAAAAGACTGGTGGAAAGAAAGGTGTACATACAGCAACTCCCCATCCTGCAAAGCAGGGTGGAAAATTTAATCAGAATGCTGCAAAGGGCCAGACTTCCAACTCTAGCAAGTCCGGCGCCTTCAAAACTGGTCAACAAAGTAAAAAGTCTAAGCAAGGTCGTCGGTGA 1104 0.4176 MDSPMEFWGVEVKVGESVKVDPKDNFEGYIHISQVALGEVKKGKASEPVVVYVKVEDQKIVLGTLKKDEIPQISIDIVLDQQSELSHNSKNASVYFSGYKVFSPEDDDSDSFSDSSDSEEELVPLKEDAQAVKEAAKSGKPAADALTKQVKVVDPKNGKTVDPEKNEGDSDESDSDYSEDEISDDEIDTDALTGSSDEETPAKKIDTESDKSDQNDTSKNSDTDTTDMDSDTDSDEETLAKKIDSDESESEEDATPKSFDADTDSDSDTDSDAESEEEAPAKKVTQGKNNKRGIGAGSQTPVPAKKAKNGTPEKTGGKKGVHTATPHPAKQGGKFNQNAAKGQTSNSSKSGAFKTGQQSKKSKQGRR 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi88g00002 367 MobiDBLite consensus disorder prediction 235 264 - -
Vivi88g00002 367 MobiDBLite consensus disorder prediction 197 226 - -
Vivi88g00002 367 MobiDBLite consensus disorder prediction 330 359 - -
Vivi88g00002 367 MobiDBLite consensus disorder prediction 106 367 - -
Vivi88g00002 367 MobiDBLite consensus disorder prediction 119 134 - -
Vivi88g00002 367 FunFam Histone deacetylase HDT1 5 105 - -
Vivi88g00002 367 Pfam Nucleoplasmin-like domain 7 100 IPR041232 -
Vivi88g00002 367 Gene3D Nucleoplasmin core domain 2 105 - -
Vivi88g00002 367 MobiDBLite consensus disorder prediction 167 193 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi88g00002 5 100 C2H2 Transcription Factor Family AT3G44750 51.042 2.40e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi88g00002 - - psat:127103750 401.749