Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi884g00004 ATGGTTTATACTTCTCTCCCACCATATATGGATCCAACAAATTGGCATCAACAACAACAAAATCATCATCAAGTGGCTAACGGTTCTAGTGTCAACACTCCTTTTCTAATTCCACAACCACAGCCTCCGCCATCGAACCTGACTCCATCGCAGCCTCATGGAAGCTCGATCAGGCCAGGTTCGATGGCTGATAGGGCTAGGATGGCGAACATACCTATGCAAGAACTATCACAAAAATGTCCAAGGTGTGATTCAACCAACACAAAGTTTTGCTACTTCAACAACTACAGTCTCTCACAGCCTCGCCACTTCTGCAAGACGTGTAGACGGTATTGGACAAGGGGCGGCGCGCTTAGAAGTGTCCCGGTTGGGGGTGGTTGCCGAAGAAACAAAAGAACTAAGTCAAGCAGTAACAACACCTCAAAGTCACCGGTCAGCTCCGATCGTCAAACTAGCTCGGCGAACAACTCTCCGGCAGTACTCAGCTCTCAGACGCCACCGCCGATGAGATTCATGCCTCCTTTTCATCAACTCGGCGATCATCACCTCGGCGAAATAGGTCTAAACTATAATTTTCCTAGTCAAATGGGAGGTGTAGGAGACTTGAATTTCCATATTGGAAGCTCCTTAGGCGGTGGTAGAAGTGGTGGTTCTGCTTCGATTTTACCTACCGGTAACTTCGAGCAATGGAGAATGCCACAAACTCATCAATTTCCCTTCTTGACAAGCTTAGAAGCTTCTTCTTCACATGGAATGTTGTATCCATTTGGTAATGATCAAGAACATGCATATGGTGGTGTGTCAAAGGTATTAACAGCTTCTAGTGTGAAAATGGAAGAGAATCAATCTAAACAATTCTTGGGAATGATCAATAGTAACAACTCCAACAACAACAACAATAATAATAATCATAATAGTGAACAATATTGGAATGCTTCTAATGGTGATGGTGGAGGTGCTACTTCAACATGGAATGACCTTTCACCTTTTAACTCTTCTTCAGCTGCTACTACAAATTCCAACTATAGAACTTAA 1035 0.4377 MVYTSLPPYMDPTNWHQQQQNHHQVANGSSVNTPFLIPQPQPPPSNLTPSQPHGSSIRPGSMADRARMANIPMQELSQKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRTKSSSNNTSKSPVSSDRQTSSANNSPAVLSSQTPPPMRFMPPFHQLGDHHLGEIGLNYNFPSQMGGVGDLNFHIGSSLGGGRSGGSASILPTGNFEQWRMPQTHQFPFLTSLEASSSHGMLYPFGNDQEHAYGGVSKVLTASSVKMEENQSKQFLGMINSNNSNNNNNNNNHNSEQYWNASNGDGGGATSTWNDLSPFNSSSAATTNSNYRT 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi884g00004 344 MobiDBLite consensus disorder prediction 122 173 - -
Vivi884g00004 344 ProSitePatterns Zinc finger Dof-type signature. 80 116 IPR003851 GO:0003677|GO:0006355
Vivi884g00004 344 ProSiteProfiles Zinc finger Dof-type profile. 78 132 IPR003851 GO:0003677|GO:0006355
Vivi884g00004 344 Pfam Dof domain, zinc finger 78 132 IPR003851 GO:0003677|GO:0006355
Vivi884g00004 344 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 51 310 IPR045174 GO:0003700|GO:0006355
Vivi884g00004 344 MobiDBLite consensus disorder prediction 288 344 - -
Vivi884g00004 344 MobiDBLite consensus disorder prediction 11 35 - -
Vivi884g00004 344 MobiDBLite consensus disorder prediction 130 164 - -
Vivi884g00004 344 MobiDBLite consensus disorder prediction 11 61 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi884g00004 19 297 C2C2-Dof Transcription Factor Family AT3G55370 40.968 3.27e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vivi884g00004 zf-Dof 1.8e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi884g00004 - - vvo:131637446 618.231