Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi87g00027 ATGATTAATGAAGCCAAAGCACTAGAACCATTTCTGCAAGATTTGTGCCATAAGACATATGATGTAACACTTAGGAGGGGAGCAAAGACTATGAATGCTTTTCATTTGAAACAATGTGTACGAACTTTTGATGTCTTTGATTTTCTGAATGATATTGTGAGCAAGGTTCCTGATTTAGGTGGTGCTGTTGCAAGTGGCGTCGACCAAACTGTCACTAAGAGGAGGAATGTTTCTGAAGATGATGATAATGACAGCGACTTCTCTTCATCCTGTATTTGA 279 0.3871 MINEAKALEPFLQDLCHKTYDVTLRRGAKTMNAFHLKQCVRTFDVFDFLNDIVSKVPDLGGAVASGVDQTVTKRRNVSEDDDNDSDFSSSCI 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi87g00027 92 Gene3D Histone, subunit A 1 55 IPR009072 GO:0046982
Vivi87g00027 92 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 5 40 IPR003958 -
Vivi87g00027 92 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 5 75 - -
Vivi87g00027 92 SUPERFAMILY Histone-fold 5 57 IPR009072 GO:0046982
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi87g00027 5 86 CCAAT-HAP5 Transcription Factor Family AT3G12480 51.136 2.65e-24 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi87g00027 K21752 - vvo:131624027 160.229