Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi87g00020 ATGAGTTGGTCTTCCTTTTATCACACAGCCTCCAGGGTTTTTCATGAGTATCCATCCTGGTCTAAGTCTGTTGTTGTATGCACTATCATCAGCGGTGGAGGTCTAGCGGCATATGGTGATACCAGATCAGCATATAGTGATAGTGGTGATCAATTCCCAAAAAAGAAGGTGGTGGTTCTTGGAACTGGTTGGGCTGGAACAAGTTTTGTGAAAAGCATGAAAAACTCCTCCTATGATATTCATGTTGTTTCACCGCGTAACTATTTTGCATTCACTCCTTTGTTACCTAGTGTCACTTGTGGCACAGTCGAGGCACGAAGTATCGTTGAGCCTATTCGAAATATCAGCAGAAAGAGTGGTTTAGATGTTCAATTCAGTGAAGCTGAATGCTATAAGATTGATCCAAAGAACAACAAAGTTTACTGCAAAGCTACTCATGACAAAAAGCTAGGTGGAACAGAAGAATTTTCCCTTGATTATGATTACTTAGTAATAGCTATGGGAGCTCGTTCTAATACCTTTAATACACCTGGTGTCGAGGAACATGCCTACTTCTTGAAGGAAGTGGAAGATGCTAAAAGAATCCGCCACAAAGTGATTAACCTTTTTGAAAGAGCAAGCCTTCCTTGTGTACCGGTGGAAGAGAAGAAAAAGCTTCTCAGTTTTGTAATTGTCGGTGGTGGTCCAACTGGTGTAGAGTTTGCAGCAGAGCTACATGATTTTGTGCATGAAGATTTGTCTAAGCTATATCCTTCTCTTAAAGACCATGTCAAGATTACTCTCCTCGAGGCTGGTGATCATATCTTGAACATGTTTGACAAGAGAATAACGGAATTTGCTGAAGGAAAGTTCAAAAGAGATGGAATTGATGTGAAATTAGGATCTATGGTTGTGAAAGTTGGTGAAAAAGAAATCTCGTCGAAAGAAAGAGGAAGTGGTGAAATTGTTACTTTACCTCATGGGATGGTAGTTTGGTCCACTGGTATTGGTGCTCGTCCTGAAATAGTTGATTTTATGAAGCAACTTGGCCAGATTAACAGGCGCGCATTGGTGACCGATGAATGGCTGAGGGTGGAAGGGTGTGACAACATCTATGCTCTAGGTGATTGTGCCACTGTTAATCAACGTAAAGTTATGGAAGATATAGCGGTGATATTTAGCAAAGCGGACAAGGACAATTCGGGAATGTTAGATCTTAAAGAATTTCAAAACGTTGTTGGAGATATTATTGAGAGGTATCCACAAGTGGACATTTATTTAAAAAGCCAAATGAAAGACATGGCATCTTTGCTAAGTAAATCTCAGGAAAGCCCTACTACAGTTGTGGACATTGAATACTTTAAACAAGCGCTTTCAAAAGTTGATTCTCAGATGAAAAATCTTCCTGCAACCGCTCAGGTAGCTGCTCAACAAGGAACCTATCTCGCAGACTGTTTCAATCGGATGGAATTGTGCGAGAGATATCCGGAAGGCCCTCTAAGGTTTAGAGGAACCGGACGCCATAGATTTCATGCATTCAGGTACAAGCATTTGGGACAATTTGCTCCTCTTGGAGGAGAACAAACTGCAGCTCAACTTCCAGGAGATTGGGTTTCAATTGGTCATAGCAGTCAGTGGTTGTGGTATTCAGTATATGCAAGCAAACTAGTCAGCTGGAGAACAAGAGCTTTGGTGATATCTGATTGGGGAAGACGATTCATATTTGGCAGAGACTCAAGTCAAATCTGA 1728 0.4126 MSWSSFYHTASRVFHEYPSWSKSVVVCTIISGGGLAAYGDTRSAYSDSGDQFPKKKVVVLGTGWAGTSFVKSMKNSSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSIVEPIRNISRKSGLDVQFSEAECYKIDPKNNKVYCKATHDKKLGGTEEFSLDYDYLVIAMGARSNTFNTPGVEEHAYFLKEVEDAKRIRHKVINLFERASLPCVPVEEKKKLLSFVIVGGGPTGVEFAAELHDFVHEDLSKLYPSLKDHVKITLLEAGDHILNMFDKRITEFAEGKFKRDGIDVKLGSMVVKVGEKEISSKERGSGEIVTLPHGMVVWSTGIGARPEIVDFMKQLGQINRRALVTDEWLRVEGCDNIYALGDCATVNQRKVMEDIAVIFSKADKDNSGMLDLKEFQNVVGDIIERYPQVDIYLKSQMKDMASLLSKSQESPTTVVDIEYFKQALSKVDSQMKNLPATAQVAAQQGTYLADCFNRMELCERYPEGPLRFRGTGRHRFHAFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKLVSWRTRALVISDWGRRFIFGRDSSQI 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi87g00020 575 Gene3D - 440 574 - -
Vivi87g00020 575 Gene3D - 48 404 - -
Vivi87g00020 575 SUPERFAMILY EF-hand 373 461 IPR011992 -
Vivi87g00020 575 SMART efh_1 381 409 IPR002048 GO:0005509
Vivi87g00020 575 ProSitePatterns EF-hand calcium-binding domain. 390 402 IPR018247 -
Vivi87g00020 575 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 46 406 - -
Vivi87g00020 575 ProSiteProfiles EF-hand calcium-binding domain profile. 377 412 IPR002048 GO:0005509
Vivi87g00020 575 SUPERFAMILY FAD/NAD(P)-binding domain 54 273 IPR036188 -
Vivi87g00020 575 SUPERFAMILY FAD/NAD(P)-binding domain 214 374 IPR036188 -
Vivi87g00020 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 160 178 - -
Vivi87g00020 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 349 371 - -
Vivi87g00020 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 57 76 - -
Vivi87g00020 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 221 239 - -
Vivi87g00020 575 Pfam Pyridine nucleotide-disulphide oxidoreductase 55 380 IPR023753 GO:0016491
Vivi87g00020 575 PANTHER NADH DEHYDROGENASE 49 575 IPR045024 GO:0003954|GO:0006116
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi87g00020 5 575 Chloroplast and Mitochondria Gene Families AT4G21490 69.031 0.0 807
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi87g00020 K03885 - gmx:100820044 976.852