Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi879g00011 ATGAGTGAATCTTCAGTGAAGAATTTGGCTATTACAGATAAGGTTCAAAAACCTGGTGGTTGTGTTGGCATTTTCTTTCAGCTTATTGATTGGAAGAAGAGACTTGTTAAGAAAAAGCTCTTCTCCAAGAAGCTTCTCACTCCTGCTCGTGCAAAAAAGTTTAGAGATGAAAAAATGCCGAATTCTAAACTTCACTTGATTGCTAATGAGAATAGTGGAGGTTTCCCGAAAGGGGGGAGTCACGGTGTAGATGTAGAGCAAAAGAGTGAAATGCGGGTTCCGAGTTTGGTGGCGAGGTTGATGGGTCTAGATTCTATTCCGGCTGCTCAGCGAGAGAAGTCGAAGAAAGCTTTGTGTCCTGATTATAGTTGTGGCGATGAGAAGGAGTGTTTGAGTGATCGTTGTGAGTTGGATAGGCAAGGTAAAGATTCGGAAATGAGAGTTGTGAAGCATGATTCGAGACCGCAGAAGCTTCAGAAAACGGGAGTGTGCGAGAGAAATGCAGTGACTAGGTTTGGAGCGGAGGCTCTTCATATTAAGAGTGTTTTATCGCGAGCGAAAAAGTATAACCAAAATCATAATCATCATCACCCGAAACTTGCTTCTCCTTTGAAAAGTCCTAGGGTTAGTTCTGGAAAAAGTGCTTCTCGAGGCTCTAGATTAATAGGAGCGGCTGCTAAGATTTTGGAACCTGGATTGCATGCGAGTAGAGGTAAAGGTTCTCTTACGAATCACGCGTCTACATGTCCTCTTAAGACCGGGATTGGAATGGATGGTGTGGGAAATAAGTCACCGGTTATGCAAAATCAATCTTGTTATGCTTCCTGCGCAGCCAAACCTTTAACAGGGCAGTCTTCTTGCAAAAATTGTGGCAATTTGCTTGATGTAATTGATTGCACGGTGGAAGTTAGGGGACAACCAGATGTTCCTCCGCCGACTGTTTCAGACGTGGAAATCAATGCTACCTCTGTGGTGTCGTCGATTAAGAAGGGAAAGTCTTTTGCTCCCTCTCAAGGACAAGGAAGAGATATCGTTCTTCCGAGAAGTCAGGGAAAGTTCTCATCTTCTGTTGCTGATGAAGAGGTGAAGAATTACGCACAACGCTCCTGGAATGAACCGACTACAATAAGAATTCCAATGCCCCGCGAAGGTCCGGCTAAATGTAGTTCATCGTGCCAACCATTGAGGGCTCAAGAGGATGATGCATCTTCTTTCGCCTATAAACACAAAACACAAGAATCAAAATTAAGTAGTGAAGGGTCTTCATCTGGATCTACATCGAGTAGTACGCAAGTAAAAAGAGTATCATCGCACGCGAGCACTGCAAGTGGGACTAAAGACTTTGTTGCTTTGAATAGAAGTGTAAGTGGTCGAACAAGGATGAGATCGCCTACTAAAGTTGATAGTTCCAAATTTAACTTAGAGAAAAAACCTTGTTATAGACAACAGCACGAGTCCCCGTCTCGTGTAAGGACATTGGAGAGGAAAAGAACCCCGAATGTCACACAACTCGAAGGCACGACTCCTGCTAATTCAGTTGGTTTGAAACAGAGAAATCTTCGCCATGATGCAAATGGTGGAAAAAGGAGGGACTTTGGCTCTTCCTCATTGAACAGTCCCAATGTAAAAAATAGAGGTGGTCAACGAGAACCGGTTAAGGTGAGCCCCAATAGGAACAATGATGCAGTTTCATTCACATTTAGTTCCCATTTGAAGCAAAAGACGGGAATGCCTGTGGAGATGGAAGAGACAAACAACAACAATGAGAGGAATAAATACTTCCAAAGACCTCAATCCTTGAAAGTTGATGAGTTAAGTTGTTTTCTAGAACAAAAGTTAAGGGAACTAACTTCTCGAAAAAATGAGTTGGCTACAAATGCTCTACCTCAAAAATCAAGTGCGGTGATTCTTCAGGAGCTGATATCTGCTCTAAGTTCAGAACATTTGATCGGTCATGACGGTCATATGCATAGTGAAGATGTTGGATTCCTTTGTGAAACCAAGCAAGAAAGATTGTTAGGAGCCTCTTGCAATGATAATCATCTCAGTCCCGGATCAGTTTTAGAAGCTTCATTTTCTTCCAGTAGTCTCGACGAAAGCTCAGGACGAGGTTTTCACCCTGATTCCGTGAGTTTCTCGTATAGCCAGCCAGAACAAATGGAACATGACGATGAACTTTTAGATTCTGCAGTGTCTTTTAATAAAGGAAGTATAAGCAAGATACTAATTGATATTGTCAACCAAATTTCTATGGCATTGCAATGGTTATATTCTTTTGGGACACATTTCTCAAGAAGCAAGCTCAACAATATGAAGAGTGTTCTAATGAATGCTGAATTAGTGCTTCGAATTGCAAATGAAAATAGCGAGGAAGAAATGCCGCCACCACAGCTTCTAATTTATCGGTTTCTTTGTAACGAATTGGATGCCATGTTGACTGATTTTAACGGTTTTGTTGGCTGTGAGGATTCCAATTCCAAACCAAGAAAGATGCTCAATGGATTTATCTTGGACTGCGTTATAGAATATCTAGAATCTAATTGTTACCAATATTTTCACTCTGGATTCAACTCATGGACGCAGCTGCCGTTATGCATGAAAGACGTGACATTGACTCAAGAGGTCACGAGAGAGGCGAATAAGTGGGCGTGTATGGTTGGGATGGTACCTGATGAAATAATTGAATGGGAGATGAGTCATTCTCTCGGGAAATGGGATGACTTTGATATTGAAGCATTTGAGGCTGGTGTTGATATAGATAGAGTTATACTTCGTAGTTTGGTTGATGAAGTTGTTGAAGAGTTTGTAGGTTGCAAGCATAGTTCTTACGCCTTTTGA 2838 0.4186 MSESSVKNLAITDKVQKPGGCVGIFFQLIDWKKRLVKKKLFSKKLLTPARAKKFRDEKMPNSKLHLIANENSGGFPKGGSHGVDVEQKSEMRVPSLVARLMGLDSIPAAQREKSKKALCPDYSCGDEKECLSDRCELDRQGKDSEMRVVKHDSRPQKLQKTGVCERNAVTRFGAEALHIKSVLSRAKKYNQNHNHHHPKLASPLKSPRVSSGKSASRGSRLIGAAAKILEPGLHASRGKGSLTNHASTCPLKTGIGMDGVGNKSPVMQNQSCYASCAAKPLTGQSSCKNCGNLLDVIDCTVEVRGQPDVPPPTVSDVEINATSVVSSIKKGKSFAPSQGQGRDIVLPRSQGKFSSSVADEEVKNYAQRSWNEPTTIRIPMPREGPAKCSSSCQPLRAQEDDASSFAYKHKTQESKLSSEGSSSGSTSSSTQVKRVSSHASTASGTKDFVALNRSVSGRTRMRSPTKVDSSKFNLEKKPCYRQQHESPSRVRTLERKRTPNVTQLEGTTPANSVGLKQRNLRHDANGGKRRDFGSSSLNSPNVKNRGGQREPVKVSPNRNNDAVSFTFSSHLKQKTGMPVEMEETNNNNERNKYFQRPQSLKVDELSCFLEQKLRELTSRKNELATNALPQKSSAVILQELISALSSEHLIGHDGHMHSEDVGFLCETKQERLLGASCNDNHLSPGSVLEASFSSSSLDESSGRGFHPDSVSFSYSQPEQMEHDDELLDSAVSFNKGSISKILIDIVNQISMALQWLYSFGTHFSRSKLNNMKSVLMNAELVLRIANENSEEEMPPPQLLIYRFLCNELDAMLTDFNGFVGCEDSNSKPRKMLNGFILDCVIEYLESNCYQYFHSGFNSWTQLPLCMKDVTLTQEVTREANKWACMVGMVPDEIIEWEMSHSLGKWDDFDIEAFEAGVDIDRVILRSLVDEVVEEFVGCKHSSYAF 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi879g00011 945 Pfam Domain of unknown function (DUF4378) 772 930 IPR025486 -
Vivi879g00011 945 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 9 934 - -
Vivi879g00011 945 MobiDBLite consensus disorder prediction 192 218 - -
Vivi879g00011 945 MobiDBLite consensus disorder prediction 332 361 - -
Vivi879g00011 945 MobiDBLite consensus disorder prediction 469 498 - -
Vivi879g00011 945 Pfam DUF761-associated sequence motif 86 111 IPR032795 -
Vivi879g00011 945 MobiDBLite consensus disorder prediction 531 545 - -
Vivi879g00011 945 MobiDBLite consensus disorder prediction 373 560 - -
Vivi879g00011 945 MobiDBLite consensus disorder prediction 416 468 - -
Vivi879g00011 945 MobiDBLite consensus disorder prediction 499 515 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi879g00011 1 935 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 30.938 1.11e-71 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi879g00011 - - aprc:113861902 1165.21