Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi874g00001 ATGACACTTTCACCATCTTTACAAAGCAGAGAAGCAAGTGCTTTGTTGAAGTGGAAAGAAAGTCTTGACAGCCAAAGCCAAACTACATTGTCTTCATGGAGTGGCAATAATTCATGCAACTGGCTTGGAGTTTCCTGCAATGAAGATTCCATGTCTGTCTCGACAGTAAATCTCACAAATATGAGACTGAAAGGTACGTTTGAAAGTTTTAACTTCTCGTCCTTTCCAAATATTGTCACTTTTGATCTTCGTGACAACTTGTTGTATGGAATTATCCCACCCACAATTGGAAAATTATTAGAGATAAAGAAAATATATCTTCTGAACAATTATCTTTCTGGATCTATACCTAGCGAAATTGGCAAGTTATTGCACATGAAAAAATTATTTCTTTCTGGAAATTATCTTTCTGGATCAATTCCTCGAGAAATTGGAAAACTGGAGAACATAACCAATCTACTTCTTAATGACAATAATCTTTCTGGTTCTATTCCTAAAGAAATTGGAATGATGAGATCTATTGTAGACATAGATTTGTCAAATAATAATCTGTGTGGTAAAATTCCAGCTGCAATTGGAAACTTAAGCCATTTACGATATCTCGGCTTTCCGGGAAACCATCTCAGTGGAACAATTCCTATGGAATTGAATATACTTGGTAATTTGGAAACATTCAGTGTATTTGATAATAATTTTACAGGTCAGTTTCCTCAGAACATTTGCGTTGGTGCAAACCTGAAATATATTGGTGCTTACAATAACCATTTCATAGGGCGAGTTCTAAGGAGTTTGAAGAATTGTTCAAGCCTTATTAGACTTAGGCTTGAAAATAACCATTTTGAGGAAAACATAACTGATTTTTTTGGTGTAAACCCAAATTTGAAGTTCATGGGATTGGATAACAATAATTTTTATGGCCACCTTTCATCTAACTTGGGAAAGTTTCATAACTTGACACATCTTCACATTTCCCGAAATCATATATCAGGCTCTATACCACCTGAACTCGGAGAAGCATCCAACTTATATTCAATTGACTTATCATCAAACCATCTTACAGGAGAAATTCCAAAGGAGTTAGGAAACTTGACAAAGTTGGGCAGACTCATTTTAAACAACAATCGTCTGTCTGGTAATGTAAAAGTAGCATCCCTAAAGGAACTTGAAATCTTAGATGTTGCAGCAAATAATCTAAGCGGTTTCATCCCAAAACAGCTTGTCACTTCGTCCAGATTATTTGACCTAAATTTGAGCCATAACAAACTTAGAGGAAATATTCCTGATGAGTTTGGTAAATTTCATGCCCTTGAAAGTCTTGATCTGAGTGGAAATATTTTGGATGGAACCATACCACAAATGCTTGGAAAACTGACACACTTGGAAACATTGAATATTTCGCATAACAACCTTTCCGGATTTATCCCTTCTTCCATTGATCAGATGATTAGTTTGTCATTTGTTGATATATCATACAACCAATTGAAAGGTCCACTTCCAGATATGCGAGTATTCAATAATGCAACAATTGAAGTGTTGAGAAATAATTCAGACTTGTGCGGTAAAGTTTTAGGGTTGAAGTCGTGCAGTGGATCTCATAATCATAAGACTAAGAATCTGATCTTATTGATAGTTTTACCTCTAGCACTAGGAATTCTAATGCTAGCATTTGTTTGTTTCAAACTCTCAAAGCATTTATGCCGAACGCGAACCACAAGAGACAACCAGGATGGTGGAATTATTGTTGCTCCGAATAATGCATTCACAATATGGAGTTTTGATGGGAAAATGGTGTATGAGAACATCATTGAAGCAACAGAAGAGTTTGATGACAAATATCTCATTGGAGTAGGAACACATGGAAGTGTCTACAAAGCTGAGTTGCACACAGGTCAAATTGTTGCTGTTAAGAAAATTCATTTAGCAACAAATGGAGAAAATTCTAATATAAGATGTTTCACAAGTGAGATTCAAGCTCTGACAGAAATTCGACATCGTAACATTGTGAAGCTATATGGATTTTGTTCACATTCACGCATGTCGCTTTTGGTCTACGAGTTCATGGAGAAAGGTAGTTTGGAAAAGATTTTGAAAGATGATGAACAAGCAATTGAATTTGATTGGAATAAGAGGGTGAATGTCATTAAAGATGTAGCAAATGCTTTATGCTATATGCACCTTGATTGCTTCCCTCCGATTGTTCACCGAGATATATCAAGCAAGAATATACTTATGGATTTAGAATATGTGGCTCGTGTCTCAGATTTTGGAACAGCTAAACTTCTTAATCCTAATTCAGCCAACTCGACCTCTTTTGCAGGCACATTAGGATATTCTGCTCCAGAACTTGCATACACAATGGAAGTGAATGAGAAATGTGATGTGTATAGTTTTGAAGTATTGGCATTGGAAATACTTCATGGAAAACACCCTGGAGACATTATATCTAATAGTATACAGTGGAACACTATGGCGGGACCAACACTTGATACTATGTCATTCATGGATATGTTGGACCAACGTCTCCCTCGTCCAATGAATACTAAAACTAAGCAGATATTATCCATTACGAAGACATTAATTTCTTGCTTGGATCAATGGTGA 2601 0.3595 MTLSPSLQSREASALLKWKESLDSQSQTTLSSWSGNNSCNWLGVSCNEDSMSVSTVNLTNMRLKGTFESFNFSSFPNIVTFDLRDNLLYGIIPPTIGKLLEIKKIYLLNNYLSGSIPSEIGKLLHMKKLFLSGNYLSGSIPREIGKLENITNLLLNDNNLSGSIPKEIGMMRSIVDIDLSNNNLCGKIPAAIGNLSHLRYLGFPGNHLSGTIPMELNILGNLETFSVFDNNFTGQFPQNICVGANLKYIGAYNNHFIGRVLRSLKNCSSLIRLRLENNHFEENITDFFGVNPNLKFMGLDNNNFYGHLSSNLGKFHNLTHLHISRNHISGSIPPELGEASNLYSIDLSSNHLTGEIPKELGNLTKLGRLILNNNRLSGNVKVASLKELEILDVAANNLSGFIPKQLVTSSRLFDLNLSHNKLRGNIPDEFGKFHALESLDLSGNILDGTIPQMLGKLTHLETLNISHNNLSGFIPSSIDQMISLSFVDISYNQLKGPLPDMRVFNNATIEVLRNNSDLCGKVLGLKSCSGSHNHKTKNLILLIVLPLALGILMLAFVCFKLSKHLCRTRTTRDNQDGGIIVAPNNAFTIWSFDGKMVYENIIEATEEFDDKYLIGVGTHGSVYKAELHTGQIVAVKKIHLATNGENSNIRCFTSEIQALTEIRHRNIVKLYGFCSHSRMSLLVYEFMEKGSLEKILKDDEQAIEFDWNKRVNVIKDVANALCYMHLDCFPPIVHRDISSKNILMDLEYVARVSDFGTAKLLNPNSANSTSFAGTLGYSAPELAYTMEVNEKCDVYSFEVLALEILHGKHPGDIISNSIQWNTMAGPTLDTMSFMDMLDQRLPRPMNTKTKQILSITKTLISCLDQW 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi874g00001 866 FunFam Nuclear pore complex protein NUP107 8 166 - -
Vivi874g00001 866 SUPERFAMILY Protein kinase-like (PK-like) 591 820 IPR011009 -
Vivi874g00001 866 FunFam Leucine-rich repeat receptor protein kinase MSP1 573 686 - -
Vivi874g00001 866 Gene3D Phosphorylase Kinase; domain 1 583 686 - -
Vivi874g00001 866 SUPERFAMILY L domain-like 37 403 - -
Vivi874g00001 866 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 220 532 - -
Vivi874g00001 866 ProSitePatterns Tyrosine protein kinases specific active-site signature. 732 744 IPR008266 GO:0004672|GO:0006468
Vivi874g00001 866 PANTHER LEUCINE RICH REPEAT KINASE 2 173 864 - -
Vivi874g00001 866 Gene3D Ribonuclease Inhibitor 8 170 IPR032675 -
Vivi874g00001 866 SUPERFAMILY L domain-like 383 520 - -
Vivi874g00001 866 Pfam Leucine rich repeat 387 444 IPR001611 GO:0005515
Vivi874g00001 866 SMART LRR_typ_2 457 481 IPR003591 -
Vivi874g00001 866 SMART LRR_typ_2 315 339 IPR003591 -
Vivi874g00001 866 SMART LRR_typ_2 123 147 IPR003591 -
Vivi874g00001 866 SMART LRR_typ_2 385 409 IPR003591 -
Vivi874g00001 866 ProSitePatterns Protein kinases ATP-binding region signature. 614 637 IPR017441 GO:0005524
Vivi874g00001 866 Pfam Protein kinase domain 610 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi874g00001 866 Gene3D Ribonuclease Inhibitor 242 537 IPR032675 -
Vivi874g00001 866 Gene3D Ribonuclease Inhibitor 171 241 IPR032675 -
Vivi874g00001 866 ProSiteProfiles Protein kinase domain profile. 608 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi874g00001 866 Gene3D Transferase(Phosphotransferase) domain 1 687 865 - -
Vivi874g00001 866 Pfam Leucine Rich Repeat 459 479 IPR001611 GO:0005515
Vivi874g00001 866 Pfam Leucine rich repeat N-terminal domain 10 47 IPR013210 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi874g00001 75 780 Receptor kinase-like Gene Family AT4G08850 45.291 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vivi874g00001 Pkinase 3.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi874g00001 - - vvo:131634792 1191.79