Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi871g00041 ATGGAGGAAGGTGAAGGAGGAGATTGTGGTCGGAAGAATGTTCCGTTGGTTTCGGAGTTTGTTGTGGCTGCTTCACCGGCGGCGGCTGCAACGGCGTGGTTGGATGCTCCGGCGAAGAAGCCAGCGAGACAGCTAGATTTCAATGTTGTGATGGAACAGTCGAAGCCACCTCAGCTGCAGACAACAACGACTGTGACGGTGCAGAAACCGGCGGGGAGTTTGCCTTTGCCGCCGATGGGACTTCACGCTTCTGTGAGGGTTGGGAAACCAGAATCTCCCAAACCAAGATCAAGACCTAACTTTGAAATGAAAGAAGGTACTCCAAAGAAGCAAAAGCAGTGCAATTGTAAACACTCTAAATGCTTAAAGCTATATTGTGAATGTTTTGCATCGGGAATATACTGCGACGGTTGCAACTGTGTTAACTGTTTCAACAATGTTGATAATGAAGCTGCTAGACGAGAGGCTGTTGAAGCTACTTTAGAGCGCAATCCAAATGCATTTAGGCCAAAAATTGCGAGCAGCCCTCAGGGAGCACGCGATAGCAGGGTGGAGGCTGGAGAAGGTGTAATATTAGTAAAACATAACAAGGGGTGCCATTGTAAAAAATCTGGCTGCCTTAAGAAGTACTGTGAATGCTTCCAAGCCAACATTCTTTGTTCTGAGAACTGTAAATGCATGGACTGCAAGAACTTTGAGGGAAGTGAAGAGAGACAGGCTTTGTGTCATGGAGATCATAATAACAACACGTATATTCAGCAAGCGGCAAATGCTGCTATAACTGGAGCTATTGGTTCCTACGGCTATTCATCACCTCCAGTATCAAAGAAACGAAAAGGCCAGGAACTCTTCTTATGGCCTGCAAACAAGGATCCATCAATTGGCAAGCCGGGACAACAGGTAAACCATGTCAAAAACTCAGCACCCTCATCATCATTATCACCCGTCTCAAGTGGTCGTGTTGCTAATGCAACATTAGGTCAGAGTCCATCAAAATTAAAGTACAGGTCTCTTTTAGCAGACATCGTACAACCACACCACCTCAAAGAGCTTTGTTCAGTTCTGGTGCTAGTATCTGGACAAGCTGCAAAAACACTTGCAGACCAGAAAATTTTAGTGGAAAAGCGTACAGAAGATGAGACACAAACATGCCTTGCTTCTTCAACTCAAGAGCAATTACCAAGTCAAAAAGAAGTTGATGTTGAGAAAGCTGTGGAAGATGATTGTTCGAGTGCAAATCAAACAGATAAAATCAGCCCAGGTAATTCCTGTTCAGATGGCGCTGACGTCTCAAAAGGGAGACCAATGTCTCCCGGGACTTTAGCCTTGATGTGCGACGAGCAAGATACAATGTTCATGACAACCGCCTCCCCCATTGGGGCAACGACCCAAGCTTGCAACACATCTTCACAATTTCCTAGTGGACAAGGAGTGACAGAGGTCTATGCTGAACAAGAAAGAGTTGTATTAACACAATTTAGAGATTTTCTCAATAGAGTTATCACTATGGGGGAAATAAATGAGACAAAGTGTTCTTCATTGGCTAGAAGTGAATCAGAGGGTCAAAAGGATCCAATCAACAGTGGAATTGGAAACACCAGTACTGAGACAGTACATCAACAAGAAGCCACTAGCAATGGTGATGCCAAACCTGTAGTTCCACCTATGGCCACAACTTCAACACCTGTGGTCCCTGGTGATGCTGCAGCTGAAAATGGTGAAACTAAGCTGAATATGGAAAAAGATGTATGA 1752 0.4486 MEEGEGGDCGRKNVPLVSEFVVAASPAAAATAWLDAPAKKPARQLDFNVVMEQSKPPQLQTTTTVTVQKPAGSLPLPPMGLHASVRVGKPESPKPRSRPNFEMKEGTPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCFNNVDNEAARREAVEATLERNPNAFRPKIASSPQGARDSRVEAGEGVILVKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALCHGDHNNNTYIQQAANAAITGAIGSYGYSSPPVSKKRKGQELFLWPANKDPSIGKPGQQVNHVKNSAPSSSLSPVSSGRVANATLGQSPSKLKYRSLLADIVQPHHLKELCSVLVLVSGQAAKTLADQKILVEKRTEDETQTCLASSTQEQLPSQKEVDVEKAVEDDCSSANQTDKISPGNSCSDGADVSKGRPMSPGTLALMCDEQDTMFMTTASPIGATTQACNTSSQFPSGQGVTEVYAEQERVVLTQFRDFLNRVITMGEINETKCSSLARSESEGQKDPINSGIGNTSTETVHQQEATSNGDAKPVVPPMATTSTPVVPGDAAAENGETKLNMEKDV 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi871g00041 583 MobiDBLite consensus disorder prediction 411 426 - -
Vivi871g00041 583 MobiDBLite consensus disorder prediction 292 323 - -
Vivi871g00041 583 MobiDBLite consensus disorder prediction 295 323 - -
Vivi871g00041 583 SMART CXC_2 194 235 IPR033467 -
Vivi871g00041 583 SMART CXC_2 109 149 IPR033467 -
Vivi871g00041 583 MobiDBLite consensus disorder prediction 514 583 - -
Vivi871g00041 583 MobiDBLite consensus disorder prediction 411 435 - -
Vivi871g00041 583 ProSiteProfiles CRC domain profile. 110 234 IPR005172 -
Vivi871g00041 583 MobiDBLite consensus disorder prediction 514 547 - -
Vivi871g00041 583 MobiDBLite consensus disorder prediction 89 107 - -
Vivi871g00041 583 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 111 146 IPR005172 -
Vivi871g00041 583 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 197 231 IPR005172 -
Vivi871g00041 583 PANTHER TESMIN/TSO1-RELATED 47 506 IPR028307 -
Vivi871g00041 583 MobiDBLite consensus disorder prediction 85 107 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi871g00041 37 516 CPP Transcription Factor Family AT4G29000 56.069 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Vivi871g00041 TCR 3.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi871g00041 - - gmx:100777698 833.558