LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi871g00023	ATGTATAAGCCATTTGTGACATGTGATGATCCAAAAGGAGTTGTTGAGTGTGGAACTATAAGAAGATATAGGTCAAGTTCTCACAAAATGAAGGACAAGACAAAGAGCCGGAAGACGGTCGAAAATTTAGAGACGAACAAAGAAGTTAAAGAAGAGAAGGTGTTGTCCAGAGGTTCGAGCGGAAGAGAATTTGATTCATCTTCTTTGCAGCTTGTGGAGGTGTCTAGAGGCGCGGAGAAATTGAACAAAATGATTAAGTCGTGGTCTAGTGGTCTAAGGTATGATGCAAAATCGGAAGATATTGCGAAGGATTTGTTAAAAGGTGCTCTTGATTTGCAAGAGTCTTTAGAGATGCTTCGGAAGGTTCAAGATGCGTCGAGTAGTATTGCTCGTTCGAAGAAAAAACAAGAGGAGGAACGTGAAAGGAGTAGGATTGATGCTAAGGTGAATGATAGAATTAGGATGACGCATTCTAATCAATTCGTTGAGCATAATTCGGCTTATGGTTCTTCGAGTAGTTGTAGAGAAGAGCTTAAGAAAGTTATTAAGGAGAGTTTGGTAAGACAAAATCTATTCCAAAGCACAAGCACTTCTGAAGGATTGGATTCGGCTTCAGCGGCGTTTCCTTCTACAAGCTCGAGTCAATCTTCTGTTGTTTGGTATGACAAACTTTCTGATTCTTCGTCGTCGCCAAATTTTCCCAAGAAGGAGAAAAGTACCAATCTCGTTGCGAAGTTGATGGGATTAGAACAAGTCCCTTCAAGAACATTTCCATCGGTTATGCAAAAACAGTTGGAGAATCAAAAGATTGTGAATCAAAAGAGACCGGTATTCGAGATTGACACACCGAAGGTAAGAAAGCATAGCTCGGTAGTCGAGAAGATTAATCCAGAAAGACAAAAGACTCTGAGGGAAATTCTTGAAACTACTCATTTCAATGGATTGTTGAAGAATAGTCCTATTAGAGAGCACAAGCTTCACAATCATGTCAATCATTCGAATGATCTTCAATACAATGAGTTTGGTGAGTTACCACCGATTGTACTCATGAAACCTCGACGTGCTTCGTATGAAGAGTACGTTGAAACTTACGAGCCGGTTCCTCAAGAAGAGTTGTCTTTTAGAAATCTAAAAGCCAAAGGAGCTCCTTCAAAAACCTTCAATCCAATGGAAGGTTCAACTACCAACATGAGAAAAGACATGGAAGAAAATCTTTCCAAAAGGGTTATCAGAGAGGAAAGACCGAAGCGCGTCAAAGAGGTTTTCGAAATTGATGTGAAAGAAATCAAACCGGTCGAAAACAAGAAGGTTCAAAAAGCTAGTCAAAGATTACAAGCAAGTGATACAGTCGACGAAAAAGCTAAGGTAAAGAACATTACAAGCAACAGAAAGCCACTTGAGAAGGAGGTTTCAAAAGCTAAAGCTGTAACAAAATCTCAAGATCAAGGAGAAATCAGGTCTACTAGTGAAAAGTTGAGGAAGCCGCGAATTGTGTCGAGAATTGACAAGAATGAGACTCCATCTAGAAAGAGCACTTCTTCAAATTCAAATACCACCATCGCAAAACCAAAGACACAAAAGGTTAATAGTTCAAAGGATTTGAAAAAGAGTCCGATGAAGAAGCAAAGATCTATCGACTTGCCCGAAGCAGCTAAACCACTCGATGAACAATTAAAGCAAGAAGACGAAATGAATATCAATGTTTCTTGTAACGATGATTGTGCTGAGATTAAAATAATCACTACAATAACAGAAGATCTCGTCATGGAGCATGAAGTAGACACCTTTTCGAATAAGACTAAAGATATTTCTGAGGAGGGCCAGAATTCTTTAGGTGACAACGTTTTGATGCCAAGTTGCGAAGATGAAAATGATGCCATCCATGCCGAGGAGCCTCATGACACCACCAGTATCGGTGAAACCGATTTTATGCAAGACAAAAACACTTCTGAGCTGAAATATTTTCTTCTCACAAGTAAATCATTCATTGACCATGCAAAGGAGCTTCTCAATCTTGATGTTGGACTTGGTTATCCTAAGATCCTAACAAAAATCGAAAGTAAAGGAATAACCAATAGCAGACTCTATTTGGACTGCGCAAACGAACTCGCCGAGAGAAAAAGCCTTCAAGAGTCATCATCACAAGTAGTTCACCCCTTATCGCTAGCTTATGTAGGGAATTCGAGATTGCAAATCTCTTTCGGAAGCTTGGTTGAAGAAGTTTACAAGGCAATTGAGAATCTGACATCTTATAGTGAAGATTCTGAGACTAAACTTCTTTTGGATAATATCTGTGCAATGTTGGAGAGAGACATGAAGTGCAACAATAGAATGATAAATGGAATATGGAACTATGGTTGGAAGCGTGGATTTTCGTGCGATGAAGTTGAACAAGTTGTTAATGAAGTCGAAAACATGGTTTTAGGTGGATTAATTGAGGAGATTATTGTAAATTTATGA	2460	0.3911	MYKPFVTCDDPKGVVECGTIRRYRSSSHKMKDKTKSRKTVENLETNKEVKEEKVLSRGSSGREFDSSSLQLVEVSRGAEKLNKMIKSWSSGLRYDAKSEDIAKDLLKGALDLQESLEMLRKVQDASSSIARSKKKQEEERERSRIDAKVNDRIRMTHSNQFVEHNSAYGSSSSCREELKKVIKESLVRQNLFQSTSTSEGLDSASAAFPSTSSSQSSVVWYDKLSDSSSSPNFPKKEKSTNLVAKLMGLEQVPSRTFPSVMQKQLENQKIVNQKRPVFEIDTPKVRKHSSVVEKINPERQKTLREILETTHFNGLLKNSPIREHKLHNHVNHSNDLQYNEFGELPPIVLMKPRRASYEEYVETYEPVPQEELSFRNLKAKGAPSKTFNPMEGSTTNMRKDMEENLSKRVIREERPKRVKEVFEIDVKEIKPVENKKVQKASQRLQASDTVDEKAKVKNITSNRKPLEKEVSKAKAVTKSQDQGEIRSTSEKLRKPRIVSRIDKNETPSRKSTSSNSNTTIAKPKTQKVNSSKDLKKSPMKKQRSIDLPEAAKPLDEQLKQEDEMNINVSCNDDCAEIKIITTITEDLVMEHEVDTFSNKTKDISEEGQNSLGDNVLMPSCEDENDAIHAEEPHDTTSIGETDFMQDKNTSELKYFLLTSKSFIDHAKELLNLDVGLGYPKILTKIESKGITNSRLYLDCANELAERKSLQESSSQVVHPLSLAYVGNSRLQISFGSLVEEVYKAIENLTSYSEDSETKLLLDNICAMLERDMKCNNRMINGIWNYGWKRGFSCDEVEQVVNEVENMVLGGLIEEIIVNL	819

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi871g00023	819	MobiDBLite	consensus disorder prediction	446	475	-	-
	Vivi871g00023	819	Pfam	Domain of unknown function (DUF4378)	690	814	IPR025486	-
	Vivi871g00023	819	MobiDBLite	consensus disorder prediction	439	551	-	-
	Vivi871g00023	819	MobiDBLite	consensus disorder prediction	25	67	-	-
	Vivi871g00023	819	MobiDBLite	consensus disorder prediction	508	527	-	-
	Vivi871g00023	819	MobiDBLite	consensus disorder prediction	123	146	-	-
	Vivi871g00023	819	Coils	Coil	33	53	-	-
	Vivi871g00023	819	MobiDBLite	consensus disorder prediction	127	146	-	-
	Vivi871g00023	819	MobiDBLite	consensus disorder prediction	484	507	-	-
	Vivi871g00023	819	PANTHER	OS01G0228800 PROTEIN-RELATED	2	818	-	-
	Vivi871g00023	819	MobiDBLite	consensus disorder prediction	34	59	-	-
	Vivi871g00023	819	MobiDBLite	consensus disorder prediction	528	551	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi871g00023	652	816	TRM (TON1 Recruiting Motif) Superfamily	AT3G24630	31.765	1.05e-17	85.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi871g00023	-		-	gmx:100797863	881.322