Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi871g00006 ATGAATAGAGGTGTTGTACAAAGCTCACCAGTTCAACAAATGATGGCTAGTAACCCTAATTGGTGGAACATCAATAACATGAGGCCTCCATCTCCACAACCTCCTCCTTTCTTTTCTACTCCTAATTCTAACTTTCTCATCCCTAATTTTACACCAAATTCTTCTTCTTCTTCTCTTCCTTTTCCTTCTTGGCATGATAATCATCAAGAGCTTCCTGAATCTTGGAGCCAACTACTCATGAGTGGAATTGTTGGTGAGGAAGATAAGATTGGAATGAGCCAATTTCAAAATCAAATGCTAATAACTCAAGCTCCAAATTCTTCTCTTGTTGATATTAAACAAGAAAGCTCAGGAAATAGCTATGCATATGGACATGGAAATGAAGAACTTAATTCATGTGTCACAAGTTTCAACACCAACAACATGTTAGATTTCTCTAACAATAATAATAATCATAATAATACAGATTTGATTCATCCACAACCAGATCTATCTTCTGAGTGCAATAGCATTTCATCTAGTGGGGCAATGAAGAAAGCTAGGGTTCAACAAGCTACTACAACTCAATCAACCTTCAAGGTTAGGAAGGAGAAGTTAGGTGACAGAATTACTGCCCTTCATCAGCTTGTTTCCCCATTTGGAAAGACTGACACAGCCTCTGTCTTGTTAGAAGCTATTGGTTATATCAGATTCCTTCAGACACAAATTGAGGCTCTTAGCTTACCATACTTGAGCAATGGATCAGGAAACACAAGACAACAACATTTAGTTCAAGGAGATAAGAATTGTTTATTCCCTGAAGACCCTGGTCAGCTGCTACATGAAAATAGCTTGAAGAGGAAAGCAGCTGAAGAGGTTTCTCAAGAAGAATCAAAGAAGGACCTAAAAAGTAGAGGGCTGTGTCTTGTTCCAGTGTCATGCACACTTCAAGTTGGGAATGACAATGGAGCTGATTATTGGGCACCTGCCCTAGGAGGAGCCTTTCGTTAG 990 0.3909 MNRGVVQSSPVQQMMASNPNWWNINNMRPPSPQPPPFFSTPNSNFLIPNFTPNSSSSSLPFPSWHDNHQELPESWSQLLMSGIVGEEDKIGMSQFQNQMLITQAPNSSLVDIKQESSGNSYAYGHGNEELNSCVTSFNTNNMLDFSNNNNNHNNTDLIHPQPDLSSECNSISSSGAMKKARVQQATTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQTQIEALSLPYLSNGSGNTRQQHLVQGDKNCLFPEDPGQLLHENSLKRKAAEEVSQEESKKDLKSRGLCLVPVSCTLQVGNDNGADYWAPALGGAFR 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi871g00006 329 Gene3D - 183 244 IPR036638 GO:0046983
Vivi871g00006 329 FunFam transcription factor bHLH68 isoform X1 190 243 - -
Vivi871g00006 329 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 193 244 IPR036638 GO:0046983
Vivi871g00006 329 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 183 232 IPR011598 GO:0046983
Vivi871g00006 329 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 61 311 - -
Vivi871g00006 329 CDD bHLH_AtbHLH_like 191 240 IPR045239 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi871g00006 1 272 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 43.553 9.87e-69 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi871g00006 - - gmx:100786555 439.113