Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi862g00014 ATGACAAACTCAGATTTGAATCCCATTTTCATCTTCCTCCTTCTCCTTGTTTCTTTTCATCATCATTACAGTACTGCAGAACCACAGCCGGGAAAACAACTATCGTTTCCTCACAGGTCTCCGACAACTTTATGGGATGTGGCGTCGGTTAGTGTAATTGTTGGAGCCATCTTTGCAACACTTCTCTTAATTTTCATCTTCTTGTTGTTGCTCCTGCGCCGCTACTTACCGTCTCAGTCATCAAAATGTGAAGCTGCCATTGGTATAAATCCTCAACTACTCAAAACTTTTCCAATTGTATTGTACTCTTCCGTAAACAAACATGTTAAGGAAGGTGATGAAGGTACTCTACCATGTGCTGTGTGTCTCGCTGAATTTGATGATAATGATACCATTCGTGTGTTACCTCGATGTGATCATTTCTTTCATCCAACATGTATTGATGCTTGGCTTTCTACTCATGTTACATGTCCTGTTTGTCGGACCAACCTCGACGGTGGCCCTGGAATTGAATCGGTAAATGAATTTGTGAAGATAAATGAGCCTGATGCTTTAGTAGCAGAAGGTGCAAGGGAGGATTGTTTGAAGTTAACCGAGGATAGAAATGTTGGCTTCAAGTAG 621 0.4138 MTNSDLNPIFIFLLLLVSFHHHYSTAEPQPGKQLSFPHRSPTTLWDVASVSVIVGAIFATLLLIFIFLLLLLRRYLPSQSSKCEAAIGINPQLLKTFPIVLYSSVNKHVKEGDEGTLPCAVCLAEFDDNDTIRVLPRCDHFFHPTCIDAWLSTHVTCPVCRTNLDGGPGIESVNEFVKINEPDALVAEGAREDCLKLTEDRNVGFK 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi862g00014 206 Pfam Ring finger domain 119 161 IPR001841 -
Vivi862g00014 206 SMART ring_2 119 160 IPR001841 -
Vivi862g00014 206 CDD RING-H2_EL5-like 119 161 - -
Vivi862g00014 206 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 166 IPR013083 -
Vivi862g00014 206 PANTHER RING FINGER DOMAIN-CONTAINING 33 164 - -
Vivi862g00014 206 SUPERFAMILY RING/U-box 101 169 - -
Vivi862g00014 206 ProSiteProfiles Zinc finger RING-type profile. 119 161 IPR001841 -
Vivi862g00014 206 FunFam E3 ubiquitin-protein ligase ATL6 77 166 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi862g00014 10 164 Rapid Response to Elicitors AT3G05200 39.881 5.37e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi862g00014 K10664 - vvo:131612393 181.8