Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi862g00011 ATGTTACCCATTATCATTTTCTTCGTCCTTGTTTGTGCTCATCAGTATTGTACCGCAGAAGCACAGTCAGACGACTCATCGGAAACATTGTGGGACTTGTCTTCACTTGGTGTAGTTCTTGAAGGCCTCATTGCAACAATTCTCTTACTTTTCATCTTTGTGTTGTTCCTAAAACGTTTCAGATACTCACAAAACGACGTAGCAGAGATACCAAAGTCTGAAAATGACACTGGTATAAATCCTCAACTACTCGAAACTTTCCCAATTGTATTGTACTCTTCCGTAAACAAACATGTTAAGGAAGGTGATGAAGATCCTCTACCATGTGCTGTGTGTCTCGCTGAATTCAATGACAATGACAGCGTTCGTGTTTTACCTCAATGCAACCATTTCTTTCATCCTCCGTGTATTGATGCTTGGCTTTCTACTCATGTTACTTGTCCTGTTTGTCGTACTGAGCTCAATCTTCAACATTCCTTTCAGTTTGCCATTTCTGTTAATACACAAATCAATGGTTGTGGTGGAATTGAAAGGGTATAA 540 0.3963 MLPIIIFFVLVCAHQYCTAEAQSDDSSETLWDLSSLGVVLEGLIATILLLFIFVLFLKRFRYSQNDVAEIPKSENDTGINPQLLETFPIVLYSSVNKHVKEGDEDPLPCAVCLAEFNDNDSVRVLPQCNHFFHPPCIDAWLSTHVTCPVCRTELNLQHSFQFAISVNTQINGCGGIERV 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi862g00011 179 PANTHER RING FINGER DOMAIN-CONTAINING 12 154 - -
Vivi862g00011 179 SUPERFAMILY RING/U-box 108 160 - -
Vivi862g00011 179 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
Vivi862g00011 179 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 156 IPR013083 -
Vivi862g00011 179 CDD RING-H2_EL5-like 109 151 - -
Vivi862g00011 179 SMART ring_2 109 150 IPR001841 -
Vivi862g00011 179 Pfam Ring finger domain 109 151 IPR001841 -
Vivi862g00011 179 FunFam E3 ubiquitin-protein ligase ATL6 67 157 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi862g00011 1 157 Rapid Response to Elicitors AT3G05200 34.659 2.13e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi862g00011 K10664 - vvo:131612393 345.125