Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi862g00007 ATGGAGCCATCGCTTTGTGCCAATGGTTGTGGATTTTATGGATCTCCTTCAAACAAGAATCTATGTTCAAAGTGTTTCAACAAATATGTCAAAGAAAATATTGCTAAATCGAGCGAGAATGAATCAACATCTTCTTATCTTTCAAAGAATCTTAGTACTAATGATATTTACGATGATGTGGAAGCTATTTCTCTCAATGACAACGAGAACATGAAGAAGAAGAAAAATAGGTGCAAGAGTTGCAACAAGAAAGTGGGACTTATAGGGTTCGAGTGTCGTTGTGGAGATGTGTTTTGTGGAATGCATAGATATCCAGAAGAACATACTTGCAAAGGGAATTTAAAGAATATTGGTCGCCAAGTATTAGAAAAACAAAACCCTTTATGTATGAGTGATAAATTAGAACACCGTATCTAA 417 0.3501 MEPSLCANGCGFYGSPSNKNLCSKCFNKYVKENIAKSSENESTSSYLSKNLSTNDIYDDVEAISLNDNENMKKKKNRCKSCNKKVGLIGFECRCGDVFCGMHRYPEEHTCKGNLKNIGRQVLEKQNPLCMSDKLEHRI 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi862g00007 138 FunFam Zinc finger AN1-type containing 6 52 133 - -
Vivi862g00007 138 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Vivi862g00007 138 SMART AN1_Zf_4 78 115 IPR000058 GO:0008270
Vivi862g00007 138 SUPERFAMILY AN1-like Zinc finger 66 132 IPR035896 -
Vivi862g00007 138 Gene3D - 1 51 - -
Vivi862g00007 138 ProSiteProfiles Zinc finger AN1-type profile. 72 118 IPR000058 GO:0008270
Vivi862g00007 138 PANTHER AN1-TYPE ZINC FINGER PROTEIN 2 135 - -
Vivi862g00007 138 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Vivi862g00007 138 Gene3D - 53 132 IPR035896 -
Vivi862g00007 138 Pfam A20-like zinc finger 4 27 IPR002653 GO:0003677|GO:0008270
Vivi862g00007 138 Pfam AN1-like Zinc finger 78 112 IPR000058 GO:0008270
Vivi862g00007 138 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 39 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi862g00007 5 135 C2H2 Transcription Factor Family AT3G52800 38.312 6.36e-27 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi862g00007 - - tpra:123902604 201.83