Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi861g00017 ATGGCTTCTCGCCAAATACAACAAGAGCAACAACCATGGCTTCTGGAGAATGGTCATCCTAAGGTCTTAACCAAGGAGTCTAGACATGGACATGGCCGGAGCCGAACCGCGCATAACATGTCGTCCTCTTCGCTGCGAAAGAAGTCCGACCGGACACTCGTGTCGAAGATTCGATGCGCTTCGGTTAGGAATGTTGTGGCTAATATCCAAGAGGTTATTCTTGGTACCAAGCTTTCCATTCTTTTTCCTGCCATTCCTGCTGCCATTGTAGCTCATTACCTTGGCTTAGGAAGATCATGGGTTTTCATATTGAGTTTACTTGGCCTCACTCCACTTGCTGAACGTGTGAGCTTTCTCACAGAACAAATTGCCATCTTCACTGGTCCTACAGTTGGAGGACTTCTTAATGCAACATGTGGGAATGTTACTGAACTTATTATTGCAATATTTGCTCTTACAAGCAACAAAATTGCTGTTGTCAAGTATTCGCTTTTAGGTTCCGTGCTTTCGAATCTTCTTCTTGTTCTCGGAACTTCTCTACTTTGTGGTGGCATTTCAAATATTGGAGTCGAGCAGAAATACGACCGAAGACAAGCGGATGTGAACTCGCTGATGTTGCTATTGGGGTTATTATGCCATTTGCTTCCGTTGCTATTCACATACAGTGCTGCATCGGCTGAACTGACAGTTGAGCCTTCGCTCTATTTGTCGAGAGCTGCTAGCATTGTGATGTTGGTTGCGTATTTTGCTTATTTGATCTTTCAACTATGGACGCATAGGCAATTGTTTGAAGCGGAAGATGAAGGTGAAGGTGAGAATAATGAAGCGGAAGAAGAGGCTGTGATTGGATTCTGGAGTGGATTTGCTTGGTTGGCTGGAATGACTGTGTTCATTGCTTTGTTGTCTGAATATGTGGTCGATACAATTGAGGATGCATCAGATTCATGGGGTTTATCTGTGAGTTTCCTCAGCATAATCTTGCTTCCAATAGTTGGCAATGCAGCTGAACATGCAGGAGCAATCATTTTCGCTTTCAAGAACAAGCTCGACATTTCCTTAGGTGTTGCGTTGGGTTCTTCTACTCAAATTGCCATGTTTGTGGTTCCTCTTTGTGTTGTTGTTTCTTGGGGAATGGGTGTGAATATGGACCTAAACTTCAACCTCCTTGAGACAGGTTCTCTTGCTCTGGCAATCATAGTCACTTCATTCACTTTACAGGATGGTACTTCTCACTACATGAAAGGCCTTGTTCTCCTACTTTGCTACTTTGTGATTGCTGCATGCTTCTTTGTACAAAGAATTCCTAATGACCCAAATGATGTTCATAACATCACTCTTAAAACTGTCACTGATTCAGTTTTAAGTGCCTAA 1371 0.4318 MASRQIQQEQQPWLLENGHPKVLTKESRHGHGRSRTAHNMSSSSLRKKSDRTLVSKIRCASVRNVVANIQEVILGTKLSILFPAIPAAIVAHYLGLGRSWVFILSLLGLTPLAERVSFLTEQIAIFTGPTVGGLLNATCGNVTELIIAIFALTSNKIAVVKYSLLGSVLSNLLLVLGTSLLCGGISNIGVEQKYDRRQADVNSLMLLLGLLCHLLPLLFTYSAASAELTVEPSLYLSRAASIVMLVAYFAYLIFQLWTHRQLFEAEDEGEGENNEAEEEAVIGFWSGFAWLAGMTVFIALLSEYVVDTIEDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSSTQIAMFVVPLCVVVSWGMGVNMDLNFNLLETGSLALAIIVTSFTLQDGTSHYMKGLVLLLCYFVIAACFFVQRIPNDPNDVHNITLKTVTDSVLSA 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi861g00017 456 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 26 433 IPR004713 GO:0006812|GO:0008324|GO:0016020
Vivi861g00017 456 MobiDBLite consensus disorder prediction 17 49 - -
Vivi861g00017 456 Gene3D - 280 431 IPR044880 -
Vivi861g00017 456 Gene3D - 129 279 IPR044880 -
Vivi861g00017 456 FunFam Vacuolar cation/proton exchanger 275 431 - -
Vivi861g00017 456 NCBIfam calcium/proton exchanger 64 430 - -
Vivi861g00017 456 NCBIfam calcium/proton exchanger 84 430 IPR004798 GO:0006816|GO:0015369
Vivi861g00017 456 Pfam Sodium/calcium exchanger protein 287 428 IPR004837 GO:0016020|GO:0055085
Vivi861g00017 456 Pfam Sodium/calcium exchanger protein 100 257 IPR004837 GO:0016020|GO:0055085
Vivi861g00017 456 FunFam Vacuolar cation/proton exchanger 129 273 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi861g00017 11 436 Antiporters AT2G38170 69.142 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi861g00017 K07300 - gmx:100779440 676.396