Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi861g00016 ATGGCTTCTGACAAAACACAAGATGAACGATCATGGCTTTTGGAGAATGGTAATCCAAAGGTCTTGAGCAAGGAATCAAGACACGGAAATGGCCGTAGTCGAAGAGCGCATAACATTTCTTCTGCTTCATTGCGAAAGAAATCTCAATTTACTCTCGTCTCCCACATTCCATGGCATTCGCTTAGGTTTGTTTTGGCTAACATCCAAGAGGTTATTCTTGGTACAAAGCTTTCCATTCTCTTCTTTGCCGTTCCTGGTGCGATGGTAGCTCATGATCTTGCCTTAGGAAGATCATGGGTTTTCATATTGAGTTTACTTGGGCTTACTCCACTTGCTGAACGCGTGAGCTTTCTTACAGAACAAATTGCTTTCTTCACCGGTCCTACAGTTGGAGGGCTTCTTAATGCAACGTGTGGAAATGCTACTGAACTCATAATTGCAATATTTGCTCTTAGCACCAATAAAATTGCCGTTGTCAAGTATTCTCTTTTGGGTTCCATTCTTTCAAATCTTCTGCTCGTTCTTGGAACTTCTCTACTTTGTGGTGGCATTGCCAATCTTAGGTTGGAGCAAAAATATGACAGAAGACAAGCAGATGTGAACTCACTTATGCTACTATTGGCATTGTTATGCATGTCGCTTCCAATGCTATTCACATACAGTGCTGCATTACCGGAACTCACAGTAGAGCCTACACTCTACTTGTCAAGAGCTGCTAGCATTGTCATGTTGGCTGCTTATTTTATTTACTTGATCTTTCAACTATGGACACATAGGCAATTATTTGAAGCTGAAGACGAAGGCGAAGGTGATAACAATGAAACAGAAGTGGCTGTGATTGGATTTTGGAGTGGATTTGCTTGGTTGGCGGGAATGACTGTGTTCATTGCTATATTGTCTGAATATGTGGTTGATACAATTGAGGATGCATCAGATTCATGGGGTTTATCTGTGAGTTTCCTCAGCATAATCTTGCTTCCAATAGTTGGCAATGCAGCTGAACATGCAGGAGCAATCATTTTCGCTTTCAAGAACAAGCTGGACATTTCCTTAGGTGTTGCTTTGGGCTCTGCTACTCAAATTTCCATGTTTGTGGTTCCCCTCTGTGTTACTGTTGCTTGGGGAATGGGTGTGAATATGGACCTAAACTTCAACCTCCTTGAGACAGGTTCTCTAGCTGTGGCAATTATAGTCACAAGCTTCACTTTACAGGATGGTACTTCTCACTACATGAAAGGCGTTATTCTCCTACTCTGCTACTTTGTTATTGGTGCTTGCTTCTTTGTACAAAGATTTCCAAGTGGCCCAAGTAAAATTCAAAACGCCACTCTTAAATCAGTGATTGGTCCAGTTACATGCGCCAATTAG 1368 0.4181 MASDKTQDERSWLLENGNPKVLSKESRHGNGRSRRAHNISSASLRKKSQFTLVSHIPWHSLRFVLANIQEVILGTKLSILFFAVPGAMVAHDLALGRSWVFILSLLGLTPLAERVSFLTEQIAFFTGPTVGGLLNATCGNATELIIAIFALSTNKIAVVKYSLLGSILSNLLLVLGTSLLCGGIANLRLEQKYDRRQADVNSLMLLLALLCMSLPMLFTYSAALPELTVEPTLYLSRAASIVMLAAYFIYLIFQLWTHRQLFEAEDEGEGDNNETEVAVIGFWSGFAWLAGMTVFIAILSEYVVDTIEDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQISMFVVPLCVTVAWGMGVNMDLNFNLLETGSLAVAIIVTSFTLQDGTSHYMKGVILLLCYFVIGACFFVQRFPSGPSKIQNATLKSVIGPVTCAN 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi861g00016 455 FunFam Vacuolar cation/proton exchanger 274 429 - -
Vivi861g00016 455 FunFam Vacuolar cation/proton exchanger 128 273 - -
Vivi861g00016 455 NCBIfam calcium/proton exchanger 81 428 IPR004798 GO:0006816|GO:0015369
Vivi861g00016 455 MobiDBLite consensus disorder prediction 1 39 - -
Vivi861g00016 455 NCBIfam calcium/proton exchanger 64 428 - -
Vivi861g00016 455 Pfam Sodium/calcium exchanger protein 285 423 IPR004837 GO:0016020|GO:0055085
Vivi861g00016 455 Pfam Sodium/calcium exchanger protein 99 256 IPR004837 GO:0016020|GO:0055085
Vivi861g00016 455 Gene3D - 128 267 IPR044880 -
Vivi861g00016 455 Gene3D - 274 428 IPR044880 -
Vivi861g00016 455 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 26 431 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi861g00016 15 433 Antiporters AT2G38170 67.453 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi861g00016 K07300 - gmx:100816231 635.565