Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi861g00014 ATGGCACCAACATCTACAGATGCTGCAAATGGATCAAACCACTCAAATGAAACCAAAGGAAAAACCATTACTTGCAAAGCTGCTGTGGCATATGGTCCAGGAGAACCCTTAGTAGTAGAAGAAATTCATGTACATCCTCCTCAAAAAATGGAAGTTCGAATCAAAATTCTCTATACCTCCATTTGCCACACCGATCTCAGCGGTTGGCAAGGCGAGTCCGAACCACAACGCGCTTTCCCTCGAATTTTCGGCCATGAAGCCTCCGGGATTGTGGAGAGTGTAGGGGAAGGAGTGAGTGACATGAAAGAAAAGGACCATGTAGTGGTGATATTCAATGGAGAATGTGGTGAGTGTGTGTACTGCACGTGTGAGAAAACCAACATGTGTGAGAGATTTGGGGTGAATCCAATGAAGAAGGAAATGTGTGATGGAACAAGTAGGTTTAGTACGAAAGATGGTAAAGCTATTTTCCATTTTATGAACACTTCAACTTTCACGGAGTATACTGTGGTGGATTCAGCTTGTGTTGTTAAGATCAATCCGGAATATAGACTGAGTCTCAAGAATCTCACCTTGCTTAGTTGTGGAGTTTCAACAGGAATTGGAGCTGCTTGGAATACTGCCAATGTTCATGCTGGTTCATCTGTAGCAGTCTTTGGTTTAGGTGCAGTTGGTCTAGCCGTTGCAGAAGGGGCACGAGCCAGAGGTGCTTCCAAAATAATAGGTGTGGATATCAACTCAGACAAGTTCATCACAGCCCGAGATATGGGAATCACAGACTTCTTAAATCCAACCGATGAAGACAGGCCGATATATGAGAGAATCAGAGAAATTACTGGAGGAGGAGCAGACTACAGTTTTGAATGTACAGGAAACTTGAATGTTCTAAGAGACGCTTTCTTGTCTGTTCATGAGGGTTGGGGATTGACTGTACTATTGGGAATTCATGCATCACCAAAGTTGCTTCCCATCCATCCAATGGAGCTCTTTGACGGTCGCAGAATTGAAGGATCGGTGTTTGGAGGTTTCAAAGGCAAAAGCCAGTTGCCTAATCTTGCCACAGAATGCATGCAAGGAGTGATAAAGCTGGATAATTTCATCACTCATGAGCTTCCATTTGAGGAGATAAACAAAGCCTTTGATCTTTTGATTGCCGGGAAGTCACTCAGATGTCTTCTGCACCTCTGA 1188 0.4386 MAPTSTDAANGSNHSNETKGKTITCKAAVAYGPGEPLVVEEIHVHPPQKMEVRIKILYTSICHTDLSGWQGESEPQRAFPRIFGHEASGIVESVGEGVSDMKEKDHVVVIFNGECGECVYCTCEKTNMCERFGVNPMKKEMCDGTSRFSTKDGKAIFHFMNTSTFTEYTVVDSACVVKINPEYRLSLKNLTLLSCGVSTGIGAAWNTANVHAGSSVAVFGLGAVGLAVAEGARARGASKIIGVDINSDKFITARDMGITDFLNPTDEDRPIYERIREITGGGADYSFECTGNLNVLRDAFLSVHEGWGLTVLLGIHASPKLLPIHPMELFDGRRIEGSVFGGFKGKSQLPNLATECMQGVIKLDNFITHELPFEEINKAFDLLIAGKSLRCLLHL 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi861g00014 395 FunFam S-(hydroxymethyl)glutathione dehydrogenase 200 338 - -
Vivi861g00014 395 SUPERFAMILY GroES-like 345 394 IPR011032 -
Vivi861g00014 395 Gene3D - 200 338 - -
Vivi861g00014 395 Pfam Alcohol dehydrogenase GroES-like domain 51 178 IPR013154 -
Vivi861g00014 395 Gene3D - 28 390 - -
Vivi861g00014 395 PANTHER ALCOHOL DEHYDROGENASE 20 392 - -
Vivi861g00014 395 FunFam Alcohol dehydrogenase 6 28 212 - -
Vivi861g00014 395 SUPERFAMILY GroES-like 18 219 IPR011032 -
Vivi861g00014 395 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 84 98 IPR002328 GO:0008270|GO:0016491
Vivi861g00014 395 Pfam Zinc-binding dehydrogenase 223 342 IPR013149 -
Vivi861g00014 395 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 185 359 IPR036291 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi861g00014 51 384 Monolignol Biosynthesis Gene Families AT2G21890 27.596 3.68e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi861g00014 K00001 - gmx:100787307 612.068