Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi860g00010 ATGTTCAAAGTCAAATGGGACAATGAAGCGCCGTCAATTGTGATCAAAAGGTTGGACGAACCTGCATTCTGTGGCGTCATTGATAATGTGCCTGATGAGAAACCATGGTTTTATGACATTAAGAAATTTCTGGAAACCCAAGAGTATCCTGAGGGTGCTTCCCTCACGGATAGGAAAACTCTGAAGAGACTATCTGCCAAGTTCTTCATTGCTGGAGGTGTGTTGTACAAAAGGAATTTTGATTCTGTGTTGCTCAGATGCGTGGATAGACACGAAGCAGCAAAGATCATGCAAGAGGTGCACGAAGGATCCTTTGGTACACATGCTAGTGGACATACCATGGCTAGGAAAATATTGAGAGCAGAAACCATTATGATAACAGTTAAAAAAAACAGAAAACTTATCGCAGACACTACTAGCATTTCTACATCCATCATGGTAGTGCCATCAAAGACTAACAAACACTGCACAGCATCTTTACACCCCGTCTTTCTCTTTATTCTTGTTTGCTTTATGAGTTTTGCAACTACTAAAGCAGAAAACGATGATGATATTCCATCGATGACTTGCTCAGAATACAATAAAACTACTCTGAATAGTGTTTTTCAAATAAATCTCAAGACCCTTCTGTCATATTTATCTGCCAACGCTACTGCCAACAAAGAGTTCTACAGCACCACAGTAGCAGACAAAAACAACTCCTCCAATACAGTCTATGGTATGTTTATGTGCATGGGTGATGTCCCTGCTCATCTATGTAGTCAGTGTGTGACATATATGACTCATTACAATTTATCAGACTCAGTAATAAACTCTGATTGTTCCCTGTCCAAAGAGGTTGCGATGAGCAATGACAATTGCATGGTCCGATATTCCAACAACTCATTCTTGTCCACTGCTGACTTAATTCACTATTCTACCTCTTGCACCTCCGTCAACATGTCAAATCAGGCAATACTTGAGGGTTTAGTTTCTGAAACTTGGAATGGAGTGGCAGATGAGGCAGCCAATTTTTCAACTGGAGTCAAGAAATACGCTACAAAGGAAGCAATGATATCTGAATTTCAAACCCTTTATTTTCAAGCTCAGTGCACACCTAACCTGACACCACAAGATTGTCGAAAATGTCTGAATGGAACCATAAAGTGGCTCCTTCAGTTTTGTGAAAGTAAAAGTAGCAATATAATAGTAGGGAAGTCTGAAACCTACAGTTGTTACATCAGAAATGATTTGTACCCTTTTTATCGCCCTAGTAATGCTCCAACCCCACAAGAACTTGTCCCAGCTTCCAATACAATTGATTCAAAATACTCGCAGCATCTTTCTTATCTTTCCCACAATTGTTCAAGCGATGACAACATGAACTATGATTTTCAATCACATCTCGCAACATTATTCTCTTCTTTGTCTTCAAATGCCATCTTAACTGGTTTTTTCAAGACGACTTTAGACACAGTCCATGGCCTCTTTATGTGTCGTGGTGATATAGCCCTCTCCCCTACCCTGTGTCAGTTGTGTGTCCAAGATGCAACCAAAAGAATATCATCAGAGTGCCCTTCCTCCAAAGAAGCTGTAATTTGGTACGATAAATGCTTACTCCGTTATTCCTATCACTCTCTCATTTCAGATATTAATACAACCGCGCCTAAATTTCACCAATTCAATATGGCCAACACTTCTCACCTCAACATGCAGCAAAGCTTCGCTACTTGGAAACTAGCAGATATTTTATCTGAAGTGCCAAAATTGCAGACAGGAGATAGTACTATAAAGAATTATGAAACAAAATCGGTAAAATTGAATGATCATCAAACCATTTACAGTCTTGCTCAGTGTACACCAGATCTGTCTGATGGGGATTGTGGCTCTTGCTTGAAAAACATTTTCCAAAACGAAATTCCTTGGAATAGTTTGGCAAGTCCAGAGGGGAAAATTCTATATCCAAGCTGCTATATGATGTTTGGACTGTCCCAATTCTACAACAATGGTAATGAACCAGAGGAGTCTGGGCATGTTAATTCTCCTCCAACAACAAAAGAAAATGAAAAAAGAAGGTCGCGAACGATGATAGTTGTTGTCCCAACCATCCTTTCAACATTACTGTTAGCATTTTTCTGCTATTTGCTAAGGAAAAGAGCAAGAAAGAGCAGTTATAAAACCTTAATTCTAAAAAAAAATTTTGGTCATGAAAGTACGACTTTAGAGGGTTTGCAATTCCAATTGGCGGTAATTAAAACAGCAACAAACAACTTTTCAAATGAAAACAAGATTGGTGAAGGTGGATTTGGACAAGTATACAAGGGAATACTTTCTGATGGAAGAGACATAGCTGTTAAGAGGCTCTCATCAACTTCAAATCAAGGCATAGTTGAGTTCAAGAATGAAATTTTATTGATAGCCAAGTTACAACAAAGAAATCTTGTGGCATTAATAGGTTTTTGCCTAGAAGATCAAGAGAAGATTCTTATTTATGAATATGTGTCAAATGGGAGTCTTGATTACTTTTTATTTGATACTCAACAACAAAATTTAAGTTGGGATGCACGTTATAAAATTATTGGAGGAACAGCTTTAGGAATTCTCTATTTGCATGAATATTCTCGCCTCAAAGTCATACATCGTGATCTTAAACCGAGCAATGTTCTATTAGATGAAAATATGAATCCGAAAATATCATATTTTGGCATGGCTAGAATTGTAGAAATAGACCAAGACAGTGGACATACAAACAAAATTGCTGGGACAAGGTAA 2751 0.3813 MFKVKWDNEAPSIVIKRLDEPAFCGVIDNVPDEKPWFYDIKKFLETQEYPEGASLTDRKTLKRLSAKFFIAGGVLYKRNFDSVLLRCVDRHEAAKIMQEVHEGSFGTHASGHTMARKILRAETIMITVKKNRKLIADTTSISTSIMVVPSKTNKHCTASLHPVFLFILVCFMSFATTKAENDDDIPSMTCSEYNKTTLNSVFQINLKTLLSYLSANATANKEFYSTTVADKNNSSNTVYGMFMCMGDVPAHLCSQCVTYMTHYNLSDSVINSDCSLSKEVAMSNDNCMVRYSNNSFLSTADLIHYSTSCTSVNMSNQAILEGLVSETWNGVADEAANFSTGVKKYATKEAMISEFQTLYFQAQCTPNLTPQDCRKCLNGTIKWLLQFCESKSSNIIVGKSETYSCYIRNDLYPFYRPSNAPTPQELVPASNTIDSKYSQHLSYLSHNCSSDDNMNYDFQSHLATLFSSLSSNAILTGFFKTTLDTVHGLFMCRGDIALSPTLCQLCVQDATKRISSECPSSKEAVIWYDKCLLRYSYHSLISDINTTAPKFHQFNMANTSHLNMQQSFATWKLADILSEVPKLQTGDSTIKNYETKSVKLNDHQTIYSLAQCTPDLSDGDCGSCLKNIFQNEIPWNSLASPEGKILYPSCYMMFGLSQFYNNGNEPEESGHVNSPPTTKENEKRRSRTMIVVVPTILSTLLLAFFCYLLRKRARKSSYKTLILKKNFGHESTTLEGLQFQLAVIKTATNNFSNENKIGEGGFGQVYKGILSDGRDIAVKRLSSTSNQGIVEFKNEILLIAKLQQRNLVALIGFCLEDQEKILIYEYVSNGSLDYFLFDTQQQNLSWDARYKIIGGTALGILYLHEYSRLKVIHRDLKPSNVLLDENMNPKISYFGMARIVEIDQDSGHTNKIAGTR 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi860g00010 916 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 711 826 - -
Vivi860g00010 916 ProSitePatterns Serine/Threonine protein kinases active-site signature. 871 883 IPR008271 GO:0004672|GO:0006468
Vivi860g00010 916 Gene3D Transferase(Phosphotransferase) domain 1 827 916 - -
Vivi860g00010 916 Gene3D Phosphorylase Kinase; domain 1 712 826 - -
Vivi860g00010 916 ProSiteProfiles Gnk2-homologous domain profile. 302 414 IPR002902 -
Vivi860g00010 916 ProSiteProfiles Gnk2-homologous domain profile. 440 540 IPR002902 -
Vivi860g00010 916 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 438 667 - -
Vivi860g00010 916 ProSiteProfiles Protein kinase domain profile. 751 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi860g00010 916 Gene3D - 437 539 IPR038408 -
Vivi860g00010 916 Gene3D - 302 414 IPR038408 -
Vivi860g00010 916 Gene3D - 551 659 IPR038408 -
Vivi860g00010 916 Gene3D - 184 296 IPR038408 -
Vivi860g00010 916 ProSiteProfiles Gnk2-homologous domain profile. 550 659 IPR002902 -
Vivi860g00010 916 Pfam Salt stress response/antifungal 190 293 IPR002902 -
Vivi860g00010 916 Pfam Salt stress response/antifungal 448 536 IPR002902 -
Vivi860g00010 916 Pfam Salt stress response/antifungal 567 654 IPR002902 -
Vivi860g00010 916 Pfam Salt stress response/antifungal 343 409 IPR002902 -
Vivi860g00010 916 MobiDBLite consensus disorder prediction 665 685 - -
Vivi860g00010 916 Pfam Protein kinase domain 752 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi860g00010 916 SMART serkin_6 751 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi860g00010 916 SUPERFAMILY Protein kinase-like (PK-like) 733 915 IPR011009 -
Vivi860g00010 916 FunFam Os07g0541700 protein 827 915 - -
Vivi860g00010 916 ProSiteProfiles Gnk2-homologous domain profile. 184 296 IPR002902 -
Vivi860g00010 916 ProSitePatterns Protein kinases ATP-binding region signature. 757 779 IPR017441 GO:0005524
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi860g00010 442 915 Receptor kinase-like Gene Family AT4G05200 42.857 9.65e-112 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi860g00010 Pkinase 1.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi860g00010 - - gmx:100785282 855.899