Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi860g00009 ATGTCTCCAGAGTATGCAATGCTTGGACAATTTTCTGAGAAGTCAGATGTTTTTAGTTTTGGTGTCATTGTTTTAGAGATTATTACTGTAAAAAGAAATATAAGTCCTTATGATCCAAATCATGTTGCGGAAGGCCTCACAAGTTATGTATGGAGACAATGGATAAATGAAAATCCATTAATCATATTGGATTCAAAAATAGAAAATTATTCTCTTATTGAAGTTATTAAGTGCATACAAATTGGTTTGTTATGTGTTCAAGAAAATCCAAATGCCAGACCAACAATGTCAAATGTTGTTTCATATCTTAACAGTCATTCCCCAGAATTACCATCACCACAAGAACCAGCATTTTTCATACACAGCAGAATCAATCAAGAAGTAACATCACAAATGGAATCAAGTTCTACCAATAATTTTGTATCATATTCTGTTAACGAGATATCTATGAGTGAAGTTTATCCTCGACAATAG 474 0.3207 MSPEYAMLGQFSEKSDVFSFGVIVLEIITVKRNISPYDPNHVAEGLTSYVWRQWINENPLIILDSKIENYSLIEVIKCIQIGLLCVQENPNARPTMSNVVSYLNSHSPELPSPQEPAFFIHSRINQEVTSQMESSSTNNFVSYSVNEISMSEVYPRQ 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi860g00009 157 ProSiteProfiles Protein kinase domain profile. 1 110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi860g00009 157 SUPERFAMILY Protein kinase-like (PK-like) 1 136 IPR011009 -
Vivi860g00009 157 Gene3D Transferase(Phosphotransferase) domain 1 1 115 - -
Vivi860g00009 157 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 152 - -
Vivi860g00009 157 Pfam Protein tyrosine and serine/threonine kinase 1 103 IPR001245 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi860g00009 1 156 Receptor kinase-like Gene Family AT4G23140 45.223 3.29e-40 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi860g00009 PK_Tyr_Ser-Thr 4.5e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi860g00009 - - mtr:25485260 259.61