Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi85g00080 ATGTCAAGGCCTGTTGAGAGAATAGCAGAGATCAATGATGGAAAAGAGCTTTGGAAGATTGTGGTTAGGATTCACCACAGATGGAAAGTTGTCTCCAACAACAAGGAACATTTTGAAATGATCTTTGTTGACAAATTGGGAGATGATATTCATGCTGTTGTTCCAGCACCGCATGTGTCGGTGTTCACCGAAAAATGCTTATTAGGGCATACTTATACTGTATCTAATTTTAAGGTGGTGCCTTATGTTCTGGCCTTCAGGGCATCAGGACACAAATATATGATAAAGTTTACTGCTGGAACGTCTGTTCTTGATGAAGACAAACATGAGATACCCCCGAAATCGATTTTATTTACAAGTTTTTCCGACATCATAACAGGGAGGTTTGACAAACATGTTCTGATTCATGTCGTTGGAATGGTGGATAGTATTGGTTATGCACAGATTGAGTCAGGTGCAAAGAAGCAGCAAATTAGCATGATGTTGCGTGATCACAGCAACAACATGTTGAACTGTACTCTGTGGGAATCATACGCGGATCAGTTCATCAAGTTTAACAAAGTTAGGGTTGCTGCATCACTCCCTACAGTTGTGTTGCTTCAGTATGCTAAAGTGAAGGAAGAAGGAAAGTATCCTCTGTCTGTGACAAACACCTACAATGTGACCCTTTTATGTGTTGATGCTGATTTTCCGGTCATGAAAGACTTTATTGATAGAATGCCTGAGGAGAGCAGGGTAACCCTGTCTGAACAACTTGGAGGGAATTCCCAATATTCCTCCCAAAGTTCTGAAAATCAACAGCTCACTCCTGTGCAAAAATTGTTCTCAAAGGCTGTTGTTTTGCCTATTGCTGAGATTATTCAACTTACGGATGTTACATTTTGTGCTATTGTCGCTACAACAAAATTATTAGTAGCATCTCCGTTTGGATGGTATAAGATTGAAATTGAGACGAATTAG 960 0.4 MSRPVERIAEINDGKELWKIVVRIHHRWKVVSNNKEHFEMIFVDKLGDDIHAVVPAPHVSVFTEKCLLGHTYTVSNFKVVPYVLAFRASGHKYMIKFTAGTSVLDEDKHEIPPKSILFTSFSDIITGRFDKHVLIHVVGMVDSIGYAQIESGAKKQQISMMLRDHSNNMLNCTLWESYADQFIKFNKVRVAASLPTVVLLQYAKVKEEGKYPLSVTNTYNVTLLCVDADFPVMKDFIDRMPEESRVTLSEQLGGNSQYSSQSSENQQLTPVQKLFSKAVVLPIAEIIQLTDVTFCAIVATTKLLVASPFGWYKIEIETN 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi85g00080 319 Gene3D - 3 104 IPR012340 -
Vivi85g00080 319 SUPERFAMILY Nucleic acid-binding proteins 7 103 IPR012340 -
Vivi85g00080 319 CDD RPA1_DBD_A_like 19 103 - -
Vivi85g00080 319 Pfam Domain of unknown function DUF223 39 134 IPR003871 -
Vivi85g00080 319 Gene3D - 110 249 IPR012340 -
Vivi85g00080 319 SUPERFAMILY Nucleic acid-binding proteins 118 243 IPR012340 -
Vivi85g00080 319 CDD RPA1_DBD_B_like 137 241 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi85g00080 8 245 Core DNA Replication Machinery Family AT5G45400 20.968 1.63e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi85g00080 - - vvo:131613993 605.134