Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi85g00032 ATGGAGATAGAGGTGGAGAGAGGGATGAGTTCAAAAAGAGGAATGCATCTAGTGTGGGAAAATTTGAGTGTTGTGATTCCAAATTTTGGGAATGGACACACAAAGAGGTTGCTTAACGGTTTGAATGGATATGGTGAACCAAACAGAATCATGGCTATTATGGGTCCATCTGGTTCTGGAAAATCTACTCTTCTTGATGCTTTGGCAGGTAGACTATCTAGAAATGTTATCATGTCTGGAAAAGTGCTTTTAAATGGAAAGAAAAGGAGTCTAGACTATGGAGTTGTAGCTTATGTGACACAAGAAGACATAATGTTGGGAACACTAACAGTCAGAGAAACAATATCATACTCAGCAAATCTAAGACTTCCAACAACAATGACAAAACAAGAGATAAATGACATTGTTGAAGGAACAATCACTGAAATGGGTCTTCAAGATTGTGCAGATAGGCTTATAGGAAACTGGCACTTGAGAGGTATAAGTGGTGGTGAAAAGAAAAGACTAAGCATAGCACTTGAAATCTTAACAAGACCTTGTCTCTTGTTCCTTGATGAACCTACAAGTGGTTTGGACAGTGCTTCAGCTTATTTTGTTGCTCAAACTTTGAGAAATATAGCTCATGATGGGAGAACTGTGATTTCTTCTATTCATCAACCGAGTAGCGAGGTTTTTGCGTTGTTTGATGATCTCTTTCTGCTTTCTGGAGGTCAAACAATTTACTTTGGACCGGCCGAAAATGCAGTTGAGTTCTTTGCGATAGCAGGATTTCCATGTCCAAGTAGAAGAAACCCTTCTGATCACTTTCTTCGCTGTATTAATTCAGACTTCGACACTGTAACGACTACCATGATGGCCTCCCGGGGAACACATGAACAAAAAACATTAGCACCGTCTACGATGAACTTATCAACAGCGGCGACCAAAGCAGTACTCATAGAGAAATACCGTTGGTCTGAATATGCGACTTGTGCAAGAGCAAGAATCAAACAAATGTCAAACTTTGACGGCCGTGATTATGAAAGTAAAAGCAAGAGCCAAGCAAAATGGTGGAAGCAACTATCGACTTTGACTCAGAGATCTTTCGTGAACATGTCTAGAGATGTAGGGTACTATTGGATAAGGTTAACAATCTATGTTGCTTTATCTTTGTGTGTTGGAACAATCTTTTTTGAAGTTGGTTCAAGTTATAATGCCATTCTTGCAAGAGGAGCATGCGGCGCTTTTATATCAGGTTTCATGACATTCATGTCCATAGGAGGATTCCCATCATTCATAGAGGAAATGAAGGTTTTCTATAAAGAAAGGATGAATGGATATTATGGAGTTGCAGTCTACATTCTGTCCAATTTTCTCTCTTCTTTTCCTTTTGTAGCAGTCATGTCCTTTGCTACTGGGACTATAACGTATTATATGGTTAAGTTTCGACCCGAGTTTTCGCATCTTGTGTATATCTGTTTGGATCTTTTGGGATGTATTGCTGTTGTGGAAAGCTCAATGATGATTATAGCTGCATTGGTTCCTAACTTTCTTATGGGATTGATAATTGGAGCAGGTTATATTGGTCTTATGATGATGACTGCTGGCTATTTCCGGCAGATCCATGATCTTCCTAAATTCTTCTGGCGTTACCCAATTTCATACATCAATTATGGAGCATGGGGATTGCAGGGAGCATTCAAGAATGACATGATTGGAATGGAGTTTGGTCCATTGATAGCTGGTGGACCAAAAGTGAAAGGAGAAATAATCCTCACAACAATGCTTGGAATGAAGGTTGATTATTCAAAATGGTGGGACTTAGCTGTGGTCATCTTCATCCTGGTTTTGCTAAGAGTTATTTTCTTTTTCATTCTCAAATTTAAGGAGAGAGTTGTACCTTTCCTTCACAGTATCTACACAAAGCAAACACTGCAACGAATCATGAAGCGGTCTTCGTTCAGGAAAACTCCGTCGTTCGCTTCCAAGAGACACCAACCACTGCATCCATTGTCTTGTCAAGAGGGTCTCAACTCTCCATGTCATTGA 2028 0.3974 MEIEVERGMSSKRGMHLVWENLSVVIPNFGNGHTKRLLNGLNGYGEPNRIMAIMGPSGSGKSTLLDALAGRLSRNVIMSGKVLLNGKKRSLDYGVVAYVTQEDIMLGTLTVRETISYSANLRLPTTMTKQEINDIVEGTITEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTRPCLLFLDEPTSGLDSASAYFVAQTLRNIAHDGRTVISSIHQPSSEVFALFDDLFLLSGGQTIYFGPAENAVEFFAIAGFPCPSRRNPSDHFLRCINSDFDTVTTTMMASRGTHEQKTLAPSTMNLSTAATKAVLIEKYRWSEYATCARARIKQMSNFDGRDYESKSKSQAKWWKQLSTLTQRSFVNMSRDVGYYWIRLTIYVALSLCVGTIFFEVGSSYNAILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYKERMNGYYGVAVYILSNFLSSFPFVAVMSFATGTITYYMVKFRPEFSHLVYICLDLLGCIAVVESSMMIIAALVPNFLMGLIIGAGYIGLMMMTAGYFRQIHDLPKFFWRYPISYINYGAWGLQGAFKNDMIGMEFGPLIAGGPKVKGEIILTTMLGMKVDYSKWWDLAVVIFILVLLRVIFFFILKFKERVVPFLHSIYTKQTLQRIMKRSSFRKTPSFASKRHQPLHPLSCQEGLNSPCH 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi85g00032 675 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 11 644 - -
Vivi85g00032 675 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 259 IPR027417 -
Vivi85g00032 675 Gene3D - 5 254 IPR027417 -
Vivi85g00032 675 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 17 261 IPR003439 GO:0005524
Vivi85g00032 675 SMART AAA_5 47 246 IPR003593 GO:0016887
Vivi85g00032 675 Pfam ABC-2 type transporter 353 561 IPR013525 GO:0016020|GO:0140359
Vivi85g00032 675 Pfam ABC transporter 41 189 IPR003439 GO:0005524
Vivi85g00032 675 CDD ABCG_EPDR 14 243 - -
Vivi85g00032 675 FunFam ABC transporter G family member 11 11 255 - -
Vivi85g00032 675 ProSitePatterns ABC transporters family signature. 161 175 IPR017871 GO:0005524|GO:0016887
Vivi85g00032 675 Pfam ABC-2 type transporter 218 301 IPR043926 GO:0140359
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi85g00032 49 232 Calmodulin-binding Proteins AT2G36910 29.756 2.44e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi85g00032 K05681 - gmx:100806806 1125.15