Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi856g00002 ATGGTGATAATAAACCAAGAGAGGAAGAAAGAATGCAAAGGAATACGATTGGGGAAATACGAATTGGGAAAAACACTTGGTGAAGGAAATTTCGGAAAAGTTAAGTTAGCAAGAAACACTGATTCGGAACAGTTTTTTGCGGTTAAGATTCTCGAGAAAAATAAGATTGTTGATCTCAACAACACTGACCAGATTAAAAGGGAGATATCGACGTTGAAGCTTTTGAAACATCCTAACGTTGTTAGGTTATACGAGGTCTTGGCTAGCAAAACCAAAATTTATATGGTGCTTGAGTATGTGAATGGAGGAGAATTATTTGACAAAATTGCATCAAAAGGTAAACTAACAGAAGCTCATGGTAGGAAGATGTTCCAACAATTGATTGATGGTGTGAGCTGCTGCCACAACAAAGGTGTCTTCCACAGAGATCTTAAGTTAGAAAATGTACTTGTGGATGCCAAAGGGAACATAAAGATAACCGATTTTAACCTCAGTGCTCTTCCGCAACATTGTGGGGCAGATGGGTTGCTACATACAACTTGTGGAAGTCCAAATTATGTTGCCCCTGAGATTCTTGCCAATAGAGGCTACGACGGTGCGAAATCGGATATTTGGTCATGTGGTGTTATCTTATATGTAATTCTAACAGGATACCTTCCTTTCGACGACAGAAATCTCGCAGTTCTCTATCAAAAGATTTTCAAAGGAGATGTTCAAATTCCGTTATGGTTGTCACCTGGCGCTCAAAACATCATAAAGCGAATTCTTGATCCGAATCCCGAAACAAGAATAACAATGTCTATGATTAAAGAAGATGAATGGTTTAAACAGGGTTATAATCCTGCAAACAGAGACGACGAGGAAGATGATGTGTACATTGGCGACGAAGCCTTTTCCATCCAAGAAGTGTGCACTGAAGCAGACCTGGCTAGTCCAAAATCGCCGAAGCTAATCAATGCGTTTCAGTTGATAGGGATGTCTTCGTGTTTAGACCTCTCTGGCTTTTTCGAGAAAGAGGATGTCTCGGAGAGAAAGATACGATTTACATCGAACCATTCTCCGAAAGATTTGACGGAAAAGATTGAGGACATTGTAATAAAGATGGGTTTTAGCGTTCAGAAAAAAAACGGAAAATTGAAAGTGATACACGAGAATAAAGCGCATAAAAGTCTAGGAAGCCTCTCGGTTGCAGCAGAGGTTTTGGAAATAGGTCCATCATTGTATGTAGTAGAACTAAGGAAATCTTATGGAGATGCAACTGTATATAGACAATTATGCAAGAAGTTGTCAAATGACTTGGGTATAGCCAAGACGGCACAGCTTGTGAGCTCGGAAATGATAAGCGTGTGTATGAAGAAAATAAGTTAG 1368 0.3955 MVIINQERKKECKGIRLGKYELGKTLGEGNFGKVKLARNTDSEQFFAVKILEKNKIVDLNNTDQIKREISTLKLLKHPNVVRLYEVLASKTKIYMVLEYVNGGELFDKIASKGKLTEAHGRKMFQQLIDGVSCCHNKGVFHRDLKLENVLVDAKGNIKITDFNLSALPQHCGADGLLHTTCGSPNYVAPEILANRGYDGAKSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFKGDVQIPLWLSPGAQNIIKRILDPNPETRITMSMIKEDEWFKQGYNPANRDDEEDDVYIGDEAFSIQEVCTEADLASPKSPKLINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNHSPKDLTEKIEDIVIKMGFSVQKKNGKLKVIHENKAHKSLGSLSVAAEVLEIGPSLYVVELRKSYGDATVYRQLCKKLSNDLGIAKTAQLVSSEMISVCMKKIS 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi856g00002 455 Pfam Protein kinase domain 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi856g00002 455 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Vivi856g00002 455 CDD CIPK_C 319 430 - -
Vivi856g00002 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Vivi856g00002 455 ProSiteProfiles Protein kinase domain profile. 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi856g00002 455 ProSiteProfiles NAF domain profile. 313 337 IPR018451 GO:0007165
Vivi856g00002 455 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 9 421 - -
Vivi856g00002 455 Pfam NAF domain 315 374 IPR004041 GO:0007165
Vivi856g00002 455 FunFam Non-specific serine/threonine protein kinase 13 315 - -
Vivi856g00002 455 FunFam Non-specific serine/threonine protein kinase 11 99 - -
Vivi856g00002 455 Gene3D Transferase(Phosphotransferase) domain 1 13 319 - -
Vivi856g00002 455 SMART serkin_6 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi856g00002 455 FunFam Non-specific serine/threonine protein kinase 315 437 - -
Vivi856g00002 455 SUPERFAMILY Protein kinase-like (PK-like) 16 295 IPR011009 -
Vivi856g00002 455 Gene3D Kinase associated domain 1, KA1 320 436 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi856g00002 83 440 CBL-interacting serine-threonine protein kinases AT3G17510 70.752 3.65e-173 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Vivi856g00002 Pkinase 5.2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi856g00002 K07198 - gmx:100815660 713.761