Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi852g00021 ATGGGGAAGAACAAGAAGAAGAGAAGTAGGGTTTCCGTCTCCGACGACGACGAAGAAATTGAAACCGATAACAACAACGATTCCAATCAGAACCAAAACTCACTCTACCAGGTTCTCGGCGTGGAGAGTACAGCGACGCAACAGGAAATAAAGAAGGCGTATCACAAATTGGCGTTGAGGCTTCATCCTGATAAGAACCCTGGTGATGAGGAAGCTAAAGCTAAGTTTCAGCAATTGCAAAGTGTTATCTCAATTCTTGGAGATGAACAAAAACGGGCGATGTATGACCAGACTGGTTCTATTGAACATGCTGACCTTGCTGGAGATGTCGTTCAGAATCTTCACGAGTATTTCAGAACAATGTACAAGAAGGTCACTGAAGCTGATATTGAGGAGTTTGAAGCAAACTATAGGGGATCCGACTCTGAGAAAAGTGATTTGATTAATCTCTACAAGGAATGCAAGGGTAATATGAGCAGGTTATTCTGTTCAATGCTTTGTTCAGATCCTAAACTCGACTCACACCGGTTCAAGGATATTATTGATGAGGCCATAGCTTCTGGAGAATTAAAGGAAAAGAAAGCATACAAAAAATGGGCAAAGAAAATATCAGAAACCAAGCCACCAACTAGTCCTTTAAGAAGGAGGGAAAAAGCAAATAAGAAACCAGAAACAGATTTGTATGCCATCATATCAAAACGACAAAATGAGAGGAAAGGCCAGCTTGACTCTATGTTCTCGTCTTTAATTTCAAAATATGGTGGAGACCACGTGCCAGAACCGTCTGAAGAGGAATTTGAAGCTACACGAAGAAAGATCGAAAGCCGGAGAGAAATGGAAAGCCGAAGATCCTCAAAAAAGGCAAAGCAAAAATAA 876 0.4121 MGKNKKKRSRVSVSDDDEEIETDNNNDSNQNQNSLYQVLGVESTATQQEIKKAYHKLALRLHPDKNPGDEEAKAKFQQLQSVISILGDEQKRAMYDQTGSIEHADLAGDVVQNLHEYFRTMYKKVTEADIEEFEANYRGSDSEKSDLINLYKECKGNMSRLFCSMLCSDPKLDSHRFKDIIDEAIASGELKEKKAYKKWAKKISETKPPTSPLRRREKANKKPETDLYAIISKRQNERKGQLDSMFSSLISKYGGDHVPEPSEEEFEATRRKIESRREMESRRSSKKAKQK 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi852g00021 291 Pfam DnaJ domain 35 96 IPR001623 -
Vivi852g00021 291 MobiDBLite consensus disorder prediction 202 291 - -
Vivi852g00021 291 SUPERFAMILY Chaperone J-domain 33 108 IPR036869 -
Vivi852g00021 291 SMART dnaj_3 33 91 IPR001623 -
Vivi852g00021 291 Gene3D DnaJ domain 18 122 IPR036869 -
Vivi852g00021 291 MobiDBLite consensus disorder prediction 257 285 - -
Vivi852g00021 291 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 22 283 IPR042977 -
Vivi852g00021 291 PRINTS DnaJ domain signature 54 69 IPR001623 -
Vivi852g00021 291 PRINTS DnaJ domain signature 36 54 IPR001623 -
Vivi852g00021 291 PRINTS DnaJ domain signature 91 110 IPR001623 -
Vivi852g00021 291 PRINTS DnaJ domain signature 71 91 IPR001623 -
Vivi852g00021 291 ProSiteProfiles dnaJ domain profile. 34 99 IPR001623 -
Vivi852g00021 291 MobiDBLite consensus disorder prediction 1 34 - -
Vivi852g00021 291 MobiDBLite consensus disorder prediction 202 240 - -
Vivi852g00021 291 CDD DnaJ 36 88 IPR001623 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi852g00021 36 96 C2H2 Transcription Factor Family AT1G74250 39.394 1.68e-08 53.5