Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi851g00004 ATGATAGCGATTCTTCAAAATTCAACTCCGACGATTGCACGTTACTCTCTTTCTAATGAGATCAAGAAGTGTTGTAACCAAATAATCATTTCATCGAATCATTGTGTAGATGCATGTATTTTTCTATGTATCAGTGATATTTTATTCCATGGACAGAAACAACATGGAGAGGCTGCTATTGATGATTGTCAAATCTTGAAGAACAAAATAGATTCGTTAAAAGAAAAGATCCATGACGAGCGACTTAAATCAATTAAAGATAAACTTTGGATAAATAGGGAGAATCTTCGGTTTCAACTTTCCGAGGTCATGGCAGCAGTGTCAAGAAATACCTCATTACAGACCGAGGAAGTTAACGCTAAAATGCTTTCTTCAAGAATTGACAATCCTGTCAGTAAGTTTAGTGGTTTCCGTCAGGGTTTAGGAAGGAGAGAACAGATACAAAATCAAGATGTATCCTTTGAGAAAAGTTTCATGTTACCAAGCTCTGAAAAGATACCTCCATATACATTTTGGTTACATTTGGCCAGGAATGAGAGAATGACCAAAGATCAATCATTTGCGGCAAGAAGAAACATATACTATCAACATGGTGGTGAAACAATGATATGTAGTGACACCGAAGAAGAGTGCAAAGAGAATAAAGAAGCTAAACATTTTTCTCAGGGTGAAGACCAAATTCTATGGATGGTATTTGAGGAACATGATTTTACTGAGGAGGCATTGAGTGTTGTTCATAGCTGTATTGGGGGCACTCACTCAGAGATTCAGGAGAGGTATAAATATCTCAAGGAAAAGGACATGCATGCTAAAAATTCTCGAGAAAGTGAATCTATTACTGGAATATGTTTGGACAAAAGTTTGAGTGCCAGTTTAAGTACTTTTGATCACTTTTTCTGTCGTCGTTGCATGATCTATAATTGTCCTTTACATGGATGTTCACAACCCTTAATATATCCTAGTGAAAAGCAATCAGTTTGGAATGAACCAGAAGGTGAGAGTAAACCCTGCAGTGATAATTGTTACCTTAAGATAAAGGATGTCAATACTTCATCAGAAAAACCAACTCTAGAGTCTTCTCCAGATAAAGAAATTAAAAAAACAGAAAATGTTGAAATGGATTATCATTTAGATCTCAATTCAGATGTTAAGGACTCAGATCTGCCAGTCTCATCATTATGTGACTCAACTTCTCCTTGTGAATCTCAAAATTCTCATAAAAAGCTGAAGCGAATCCTAGAGAGCAAAGAAACTGCAAATGGAGATTATAACAAAGAAAGTGCGGAAATCACAGATAAAATAGAATTGTTGCGATTATCCAACTCAATGGAATGGCAAGTTGATGAGAAGCATAGTATATCAGATTGGAAACCTTTAGAGAAAGATTTATATTTGAAGGGAATTGAAATGTTTGGGAGAAACAGTTGTCTTATATTTCGAAACTTACTTTCTGGATTCAAGACTTGCACGGAAATAGCCAGCTACATGCGTGTTGAAGAGGCGGCCCGTAGATCCATAGATGAAAATGGAAAATTTGATGCAAAGTGCACTGACCATGAGATGCGATCAAGTTTAAGGTCATCTAAAAAAAAAGGAAAGAGCAAGCAATTCAAATATTTACCAAAGACTCCACGCCTCAAGCCGAATAGAATTAATGCTGGAGGAAACATACTCCTGACGCATTATACACCTTGTGAGTGTCAAGGAAAGTGTGGAAAACAATGTCCTTGTCGTCTTAATGGATATTGCTGTGAAAAGTATTGTGGGTGCGCTAAACTATGCGGAAATCGGTTCAGAGGATGCCATTGTGTTATAACTCAATGCAGAAAACGAAACTGTCCATGCTTTGCAGCAAACCGGGAATGTGACCCAGATGTCTGTAGAAATTGTTGGGTTAGTTGTGGTGATGGTTCATTAGGAGAGCCACCTCATCATGGAGAAAATGAATGTGAAAACATGAATCTTTCTTTAGGGAAAAAACAAAGGATTCTTTTAGCCAAGTCTGATGTTGCTGGATGGGGAGCCTTCTTAAAGAATCCTGCCAACAAAGATGATTTTTTAGGAGAGTATACAGGTGAATTAATATCTCATACAGAAGCAGAGAAGCGTGGTAAATTGTATGAGCGTGCAGACTTCTCTTTTCTTTTTGACTTGGATGATGAGTATGTTATTGATGCTTATCGCAAAGGAGACAAGTTAAAATTTGCAAACCACTCCTCAAAACCCAACTGTTATGCAAAGGGTATGTTTGTTCGTGGAGACCATCGAGTAGGCATATTTGCTGGGGAACGCATTGAAGCTGGTGAGGAACTTTTCTATGATTACAAGTATGCTGCAAATCACAGAGCACCTGCATGGTTTGTTAAAGCCAATAATGCTGCCAAGAAAAAAGAACTTGCAAATTCTCATGGCAAAGCCAAGAAACGCTAG 2430 0.3761 MIAILQNSTPTIARYSLSNEIKKCCNQIIISSNHCVDACIFLCISDILFHGQKQHGEAAIDDCQILKNKIDSLKEKIHDERLKSIKDKLWINRENLRFQLSEVMAAVSRNTSLQTEEVNAKMLSSRIDNPVSKFSGFRQGLGRREQIQNQDVSFEKSFMLPSSEKIPPYTFWLHLARNERMTKDQSFAARRNIYYQHGGETMICSDTEEECKENKEAKHFSQGEDQILWMVFEEHDFTEEALSVVHSCIGGTHSEIQERYKYLKEKDMHAKNSRESESITGICLDKSLSASLSTFDHFFCRRCMIYNCPLHGCSQPLIYPSEKQSVWNEPEGESKPCSDNCYLKIKDVNTSSEKPTLESSPDKEIKKTENVEMDYHLDLNSDVKDSDLPVSSLCDSTSPCESQNSHKKLKRILESKETANGDYNKESAEITDKIELLRLSNSMEWQVDEKHSISDWKPLEKDLYLKGIEMFGRNSCLIFRNLLSGFKTCTEIASYMRVEEAARRSIDENGKFDAKCTDHEMRSSLRSSKKKGKSKQFKYLPKTPRLKPNRINAGGNILLTHYTPCECQGKCGKQCPCRLNGYCCEKYCGCAKLCGNRFRGCHCVITQCRKRNCPCFAANRECDPDVCRNCWVSCGDGSLGEPPHHGENECENMNLSLGKKQRILLAKSDVAGWGAFLKNPANKDDFLGEYTGELISHTEAEKRGKLYERADFSFLFDLDDEYVIDAYRKGDKLKFANHSSKPNCYAKGMFVRGDHRVGIFAGERIEAGEELFYDYKYAANHRAPAWFVKANNAAKKKELANSHGKAKKR 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi851g00004 809 Coils Coil 56 83 - -
Vivi851g00004 809 Gene3D SET domain 562 778 IPR046341 -
Vivi851g00004 809 FunFam Putative histone-lysine N-methyltransferase EZH2 562 778 - -
Vivi851g00004 809 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 65 791 IPR045318 GO:0006338|GO:0042054
Vivi851g00004 809 ProSiteProfiles CXC domain profile. 541 647 IPR026489 -
Vivi851g00004 809 SUPERFAMILY SET domain 535 777 IPR046341 -
Vivi851g00004 809 Pfam CXC domain 600 631 IPR041355 -
Vivi851g00004 809 CDD SET_EZH 661 777 - -
Vivi851g00004 809 SMART set_7 661 782 IPR001214 GO:0005515
Vivi851g00004 809 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 809 IPR025778 GO:0031519
Vivi851g00004 809 ProSiteProfiles SET domain profile. 661 776 IPR001214 GO:0005515
Vivi851g00004 809 SMART CXC_2 596 633 IPR033467 -
Vivi851g00004 809 Pfam SET domain 672 775 IPR001214 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi851g00004 650 775 C2H2 Transcription Factor Family AT2G23740 29.371 4.24e-12 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi851g00004 SET 2.9e-12 No_clan